Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1309 ATGAATATGGCAGATTATATATCTTGCTTCAATGAGAACGCAGTGAATGTGTCACAGTCTTCGTGTTCTAGCTACTCAAAAAACGCGTGCATATCTCCCAGTGTTACACCTTCAACACAAAACTCGGTGTCCTCTGTCTACAAAACCACCCTCTCCAACCAAAAGCAGGTTCTCATCACAGTCACGTGGTGCAAGAGCAACTCCAACCAAGGACTCGCCATAAGCTTCGGCGAAGAGAACCCTTTGGCACCGTCTTTCAGGCTCAACACGAATTCACGGTTTTTCAGGAAAAAGAAGGGAAGCAAGGTCCTAGAATCCGAAGACTCTAAGGTTGAAGTGTTCTGGGACCTCTCGAAGGCCAAGTACGAGACTGGTCCCGAACCTGTTGAAGGGTTTTACGTGGCGATTCTTGTTGATGCAGAGATAGGCCTTGTTCTGGGAGAAGAAGATGTGGTGAAGAAGTTCAAAACGAGAACCCTTCTGGCCAAAGTGTCGCTGTTGTCACGGCGTGAACATTGCTCTGGCAACGCCGTTTACGCCACCAAGGCTCAGTTCTGCGACACTGGAACTTGGCATGACATTTTGATCCGATGCAGTGGCGAGAATGAGGGCCTCAAGGCTCCTGTTTTGTCCGTTTGCATTGATAAGAAAACGGTGATCCGTGTGAAGAGGCTGCAGTGGAATTTCAGGGGCAACCAAACCATTTTTGTTGATGGGTTGCTGGTGGATTTGCTGTGGGATGTTCATAACTGGTTTTTCAACCCCGCTTCTGGGTATGCAGTGTTCATGTTCAGGACCAGAAGTGGCTTGGACAGCAGATTGTGGTTAGAGGAAAAGATTGCACAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCATGTAAGAGCACATGA 903 0.4729 MNMADYISCFNENAVNVSQSSCSSYSKNACISPSVTPSTQNSVSSVYKTTLSNQKQVLITVTWCKSNSNQGLAISFGEENPLAPSFRLNTNSRFFRKKKGSKVLESEDSKVEVFWDLSKAKYETGPEPVEGFYVAILVDAEIGLVLGEEDVVKKFKTRTLLAKVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKIAQKDKDRVEFSLLIYACKST* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1309 300 PANTHER EXPRESSED PROTEIN 3 299 IPR008586 -
Pvu5g1309 300 Pfam Plant protein of unknown function (DUF868) 38 298 IPR008586 -
Pvu5g1309 300 PANTHER DUF868 FAMILY PROTEIN 3 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1309 Pvu-Chr5 35112759 35113661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1309 3 299 EF-hand Containing Proteins AT5G28150 39.145 6.01e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1309 - - gmx:100798692 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1309 5 35112759 35113661 Pvu5g1309 5 35112759 35113661 ECH
Pvu5g1309 5 35112759 35113661 Pvu11g0931 11 9039534 9040902 PCT