Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1306 ATGCTGGCAATGGGGGAATTCAAACACTTTGTGATTGTTAAGTTCAAGGAAGGTGTGGCAGTTGATGAGCTCACAAAAGGGATGGAGAAGTTGGTCTCTGAGATTGATGCTGTCAAGGCCTTTGAATGGGGGCGTGACATTGAAAGCTTAGATGTGCTGAGACAAGGTTTCACTCATGCCTTCCTAATGACATTCAACAAGAAAGAAGACTTTGCTGCATTTCAAAGCCACCCAAATCATGTGGAGTTCTCCACAACATTTTCAGCAGCCATTGAGAACATTGTGCTGCTGGATTTCCCATCTACTCTTGTCAAGGCTCCAGCATAA 327 0.4434 MLAMGEFKHFVIVKFKEGVAVDELTKGMEKLVSEIDAVKAFEWGRDIESLDVLRQGFTHAFLMTFNKKEDFAAFQSHPNHVEFSTTFSAAIENIVLLDFPSTLVKAPA* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1306 108 Pfam Stress responsive A/B Barrel Domain 8 100 IPR013097 -
Pvu5g1306 108 SUPERFAMILY Dimeric alpha+beta barrel 4 101 IPR011008 -
Pvu5g1306 108 ProSiteProfiles Stress-response A/B barrel domain profile. 7 99 IPR013097 -
Pvu5g1306 108 PANTHER EXPRESSED PROTEIN 4 107 - -
Pvu5g1306 108 PANTHER - 4 107 IPR044662 -
Pvu5g1306 108 SMART Dabb_2 7 101 IPR013097 -
Pvu5g1306 108 Gene3D - 3 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1306 Pvu-Chr5 35071363 35072230 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1306 - - pvu:PHAVU_005G126400g 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1306 5 35071363 35072230 Pvu5g1306 5 35071363 35072230 ECH
Pvu5g1306 5 35071363 35072230 Pvu11g0938 11 9136312 9137123 PCT