Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1278 ATGCCCAGTAACAGATTTGCAATGGCAACTTCTTCTTTCTTCTTCCCTTTGCTATTGCTGCTTCTCACTTTTTCAGATTTGTTTGTGCAAACCCGGAGTCTAAATTTTGGAATCAACTACGGGCAAATAGCTGACAACCTTCCATCTCATTCTCGTGTGGCTGCTCTTATAAAATCTCTGAATGTCACAAAGATCAAACTCTATGATTCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGACGTGGAATTCATCATAGGAGTTCGGAACGAGGATCTGCCGAGTTTGAAGGACCCTTCTAATGCTCAGAGCTGGATTCAACAGCATGTTCAACCTTATATTTCACAAACCAAGATCACTTGCATAGTTGTAGGGAACGAGGTGTTCGACTACAATCTCTCTCAGCTTACAGTAAATCTCCTCCCTGCAATGCAAAGTATGTACAATGCTCTGGTTAATCTAGGACTAGCACAGCAGGTTACTATTACTTCTGCTCATTCTTACAAAATTTTAGCCTCCTCGTTTCCTCCTTCATCAGGAGTATTCAGGCAAGATCTGATACAATATATTCAACCCATCCTTAGCTTTCATTCTCAAATTAAATCACCCTTCCTCATCAATGCATATCCCTTTTTTGCATACAAGGATAACCCAAACCAAATTTCCTTGAATTATGTGTTGTTTCAGCCAAATTCAGGGTCTACTGACCCAATTACCAATTTGCATTATGATAACATGTTGTTTGCTCAAATTGATGCTGTCTATGCTGCCATTAAAAAACTGGGGCATACTGATATTGTAGTCAAGATTTCGGAAACTGGTTGGCCTTCTAAAGGTGACCCTGATGAAGTTGGAGCCTCACCACAGAATGCAGAAACATATAATAGTAATCTGTTGAGAAGGATAGCGCAGAAACAAGGCACTCCTGCAAATCCATCTGTTCCAATTGATATTTTTGTCTTTGCACTTTTCAATGAGAATTTGAAGCCTGGTCCAGTATCAGAGAGAAACTATGGCCTCTATTATCCTGATGGCAACCCAGTTTATAACATTGGATTACAAGGTTATCTCCCAGGAATGACTTTTGACTCCAAATCTAACGTGTTGTCCTTCAATTTTGTCGTCTACATATTTACATTTTTGTTGTTCACTTGGGCGCTTTCAAGACAGTGA 1176 0.3963 MPSNRFAMATSSFFFPLLLLLLTFSDLFVQTRSLNFGINYGQIADNLPSHSRVAALIKSLNVTKIKLYDSDPNVLSAFSNSDVEFIIGVRNEDLPSLKDPSNAQSWIQQHVQPYISQTKITCIVVGNEVFDYNLSQLTVNLLPAMQSMYNALVNLGLAQQVTITSAHSYKILASSFPPSSGVFRQDLIQYIQPILSFHSQIKSPFLINAYPFFAYKDNPNQISLNYVLFQPNSGSTDPITNLHYDNMLFAQIDAVYAAIKKLGHTDIVVKISETGWPSKGDPDEVGASPQNAETYNSNLLRRIAQKQGTPANPSVPIDIFVFALFNENLKPGPVSERNYGLYYPDGNPVYNIGLQGYLPGMTFDSKSNVLSFNFVVYIFTFLLFTWALSRQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1278 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 14 369 - -
Pvu5g1278 391 Pfam Glycosyl hydrolases family 17 37 352 IPR000490 GO:0004553|GO:0005975
Pvu5g1278 391 Gene3D Glycosidases 35 358 - -
Pvu5g1278 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 369 IPR044965 GO:0004553|GO:0005975
Pvu5g1278 391 SUPERFAMILY (Trans)glycosidases 36 352 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1278 Pvu-Chr5 34727651 34731475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1278 86 386 Glycoside Hydrolase AT2G27500 63.576 1.10e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1278 - - gmx:100786020 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1278 5 34727651 34731475 Pvu5g1278 5 34727651 34731475 ECH
Pvu5g1278 5 34727651 34731475 Pvu11g0972 11 9665150 9668388 PCT