Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1260 ATGGACACAACTTCTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCCAACATAACCACCCTCCACCCCGACATCATTCAATCCCACATCCTTAATCGCCTCGACGCTCCCACCCTCGCCTCCGCATCCTCCACCACCCTCCACCTGCGCCGGCTCTGCACCGATCAACACCTCTGGCGGAACATCTGCGCCGCCACCTGGCCCTCTCTCAACCAACCCCGTGCCGCTGACCTCATCGCTACCTTCCCCGCCGCCCACCGCTCTGTCTTCTCCGACTCCTTTCCCTCCATCCACCACTCCCCTTCTCCGCACCCCACCCCAACGCGGCCGCCGCCGGAGCTTGTATCCGCCGTGGACCTCTACTACAAGGGCAAACCCGTCTTTTCGCGCGTCATCACAACCGATACCCAAAAGGGCTGGTTCCTCTCCTCCCCGCTCTGGGTGGACCTCCTCGACCCCAACGAGGTGGTCCCCACTCCCTTGATATTCGCGAAGTGCGAGGAGGAATCTTCGCGGCTGGCCCACCTAGAGCAGAATCTGGAGCTGAGCTGGATCGTCATCGACCCGACGGGGAAGCGCGCGGCGAACCTCTCGAGCCGGCGGCCGGTGGCGGCGCGGCGGCACTGGCTGACGGGGGATCTGGAGGTTTCGTTCGCGGTGACCATGGAGAGTGTCCAGTGCGTTATAAGGGTGACGTGCTTCGGGAAGGCCGGGGGGGCTATGCACGTGAGGGAGGTGGGCCTGATGATGGAGGACACGGAGGGGAGACACGTGATTGGCAGGGACAGTTTCGTAATTTTGCAAGACGCCATGGCGAACGGCGAGAGACGAAAACCTGATCCCGAAGAAGCCAGAGCAAGGTTCGAGAAATTCTGCCGCCTGAAGAAAGATATCAGAGAGAGAAAAGTACGGAGAGACAATGCAATGGACATGGTTGCCATGTTGGTCTCTTTCACCGTTTTCGTTTCACTCTTTTGGTTCATGGTCTTTGGCTTTTGA 1002 0.5908 MDTTSFSSSSSSSSSSSNITTLHPDIIQSHILNRLDAPTLASASSTTLHLRRLCTDQHLWRNICAATWPSLNQPRAADLIATFPAAHRSVFSDSFPSIHHSPSPHPTPTRPPPELVSAVDLYYKGKPVFSRVITTDTQKGWFLSSPLWVDLLDPNEVVPTPLIFAKCEEESSRLAHLEQNLELSWIVIDPTGKRAANLSSRRPVAARRHWLTGDLEVSFAVTMESVQCVIRVTCFGKAGGAMHVREVGLMMEDTEGRHVIGRDSFVILQDAMANGERRKPDPEEARARFEKFCRLKKDIRERKVRRDNAMDMVAMLVSFTVFVSLFWFMVFGF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1260 333 PANTHER F-BOX PLANT-LIKE PROTEIN 15 327 - -
Pvu5g1260 333 SUPERFAMILY F-box domain 12 75 IPR036047 GO:0005515
Pvu5g1260 333 PANTHER F-BOX PROTEIN-RELATED 15 327 IPR045283 -
Pvu5g1260 333 Gene3D - 4 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1260 Pvu-Chr5 34585811 34586812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1260 - - gmx:100781337 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1260 5 34585811 34586812 Pvu5g1260 5 34585811 34586812 ECH
Pvu5g1260 5 34585811 34586812 Pvu11g0993 11 9927267 9929669 PCT