Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1238 ATGGAGAACCCAGGGTGCACTCATGCATGGAGAACCCTAGCCGAGAAACCACGAACCATGTTAGTTAACTTCACAAAGATGGTGGTAAAACTTGGAAAAGATGACCCCAGAAGGATAATTCACTCCTTTAAGTTCGGATTTGCTCTGGTATTAATCTCCATTCTGAAATATTTTCGTCCCTCCTTTTATGCTTTTGGCGACAACATAATGTGGGCCGTTCTCACCGTCGTTCTTGTCCTGGAGTTTTCTGTGGGTGCAACACTAGGAAAAGGTTTCAACAGGGTGTTGGCGACGGGGTCTGCTGGTGCTCTTGCTGTTGCACTCCGTAAAATAGCAAGTTATTCTGGAGATAAAGGAAAGCTCGTGTTGACTTCGGTCACTGTATTTTTCGTAGCTGGAACGGTGACGTTTATGAGATTTTCCCCGCGACTGAAGGCGAGATATGATTATGGGATGATTATTTTTATATTGACCTTTTGTTTGGTATCTCTTTCTGAGAATAGTGAGAATGATTTGTTAGAAGTTGCTCAAGAGAGGTTATTAACGATCATTATTGGGAGTTGTATAGCTATTACGGTATGTATTTGCATATTCCCCGTTTGGATTGGCCAGGATCTTCACAATCAGATTGCTTCCAATGTTGTAAAGCTCGCAGAGTTCTTAGAAGGATTTAGAGATGAATACTTCAACAATTTGGAGAATACAGCAGAAGCTGAGAATGATAAGCCATTTCTCCACAGATATGAAAGTATCCTCTCCTCAAAAACTAGTGAAGAAACCATGGCTGTTTTGGCAAGATGGGAACCTTGTCATGGCAGGTTCAGATTTCGCCATCCATGGAACCAATACTTGAAGATTGGAAACCAAATTCGGTTGTGTGCTTACAAAATTAAAGCTCTCAGTGTCTTCCTCCTCCGCTCTGATACGACCCCATATGAATTTCGAAGCAGGATTGAAGAGCCATGCACAAACATCATAATGGAATCTGTGAAGGCTCTTAAGGAATCATCAGTGATACTTAAAAACATGGCTAAGTCACCAATGCCAAATCCACATGTGGCGAATGCTAAAAATGCTGCTGAGTCTCTTAAATCCGTTCTAAGAACAAATCCGTGGGAAGGAGCTGATCATCTGGAGATAATACCAGTGGCTACAGTGGCATCACTTCTAATTGATTTAGTTTTTTGTGTTGAGAAAATTTGTGAAGCTGTTGATGAACTAGCAAACCTTGCAAATTTTGTGCCGTCTGAGCTACTCCATCGAGGAACAGTGCAACCTATTTCTGATAATGATGGTTCGGTTCATGTCATCTCCATTGCTGAATGA 1326 0.4163 MENPGCTHAWRTLAEKPRTMLVNFTKMVVKLGKDDPRRIIHSFKFGFALVLISILKYFRPSFYAFGDNIMWAVLTVVLVLEFSVGATLGKGFNRVLATGSAGALAVALRKIASYSGDKGKLVLTSVTVFFVAGTVTFMRFSPRLKARYDYGMIIFILTFCLVSLSENSENDLLEVAQERLLTIIIGSCIAITVCICIFPVWIGQDLHNQIASNVVKLAEFLEGFRDEYFNNLENTAEAENDKPFLHRYESILSSKTSEETMAVLARWEPCHGRFRFRHPWNQYLKIGNQIRLCAYKIKALSVFLLRSDTTPYEFRSRIEEPCTNIIMESVKALKESSVILKNMAKSPMPNPHVANAKNAAESLKSVLRTNPWEGADHLEIIPVATVASLLIDLVFCVEKICEAVDELANLANFVPSELLHRGTVQPISDNDGSVHVISIAE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1238 441 Pfam Aluminium activated malate transporter 30 408 IPR020966 GO:0015743
Pvu5g1238 441 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 7 420 - -
Pvu5g1238 441 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 7 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1238 Pvu-Chr5 34270204 34272783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1238 30 439 Miscellaneous Gene Families AT1G08440 45.000 9.51e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1238 - - gmx:100786663 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1238 5 34270204 34272783 Pvu5g1238 5 34270204 34272783 ECH
Pvu5g1238 5 34270204 34272783 Pvu11g1018 11 10377504 10380311 PCT