Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1219 ATGGAGTCTCAGCTTCACCCAAAGCTCAACCATCTTTTATGCTTATTCATCCTTACCCTTTCATTTGCCCACGCTCAAGCTACTACCTTCGGATACTGCGCTGATGTGAACTATGATGTAAAGGTGTCTGGAGTTGAAATCACACCAGACCCTGTTGTACGTTCTAGGCCTGTCACCTTTAAAATTTCAGCTGCTACTGGTGAAGCTATTTATGGAGGAAAGTGGGTAATTATAGTTGCATACTTTGGCTTTGTTGTCCATAAAGAAATCCATGATTTTTGTGAGGAAGTATCTTGTCCTGTTGCTACTGGCAGTTTTGTGGTTGCTCACACCCAAAAATTACCTGCATTTGCCCCACCGGGCACCTACACCGTGGAGATGACACTAAAAAATGAAAAGAACAAGCCATTAACATGCATCACCTTTAATTTAAAAATCGGTTGGGGATTTTTGGTGTCCAATATCTGA 468 0.4188 MESQLHPKLNHLLCLFILTLSFAHAQATTFGYCADVNYDVKVSGVEITPDPVVRSRPVTFKISAATGEAIYGGKWVIIVAYFGFVVHKEIHDFCEEVSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITFNLKIGWGFLVSNI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1219 155 Pfam ML domain 28 146 IPR003172 -
Pvu5g1219 155 Gene3D - 28 147 - -
Pvu5g1219 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 6 149 IPR039670 -
Pvu5g1219 155 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 6 149 - -
Pvu5g1219 155 CDD PG-PI_TP 30 142 IPR033917 GO:0032366
Pvu5g1219 155 SUPERFAMILY E set domains 27 146 IPR014756 -
Pvu5g1219 155 SMART pgtp_13 30 144 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1219 Pvu-Chr5 33897542 33900361 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1219 - - gmx:100818265 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1219 5 33897542 33900361 Pvu5g1219 5 33897542 33900361 ECH
Pvu5g1219 5 33897542 33900361 Pvu11g1031 11 10805528 10809833 PCT