Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1197 ATGTTGCAGCTTCTCTACGCCGTCATTTTCGCCCAAATGTTCGTCATCGTTTCCTTCCTCTTCAAAACTCCGGCCAGGAAGCTAGTCATTCTCACATTGGATCGCCTCAAGCGCGGCCGCGGCCCCGTCGTCGTTAAGACCGTCGCCGCCACGCTGCTCGTGGTGCTCGCTTCCTCGCTCTACAGCATCGCCAAGATCCAGCGTCGGAGCCTCGACGCTTCCGTTGTTAACCCCACCGACCAAGTCCTCGTCTCTAAGCACACGCTCGAAGCTTCTCTTATGGGGTTTGTGCTGTTCCTGTCTCTGATGATAGACAGATTGCACCATTACATCAGAGAGCTTCGGTTACTGAGGAAGACCATGGAAGCTGCTAAGAAACAGAGTCGAAGTTTTGAGGATGGTAAAAGTGTCAGTGCAGCTGAGCACAAGGCTTTGGTGGAAGAAATTTCCGGATTTAAGGCCGAAGTTGAGAAACTGGAATCTGAGTGTGAAGTAAAAGCAAGCAAGGCTAAGACCTTGGAGGCTGAGGTGGAGGCTCTTAGAAAGCAATCCGAGGGGTTTCTAATGGAATATGATCGGCTCTTGGAAGACAATCAGAATCTTCGGAGTCAGTTGCAGGCTATTGACCTCAGTCCTTCCCATGCTGTTAACAAAAAGAGCACCTGA 666 0.509 MLQLLYAVIFAQMFVIVSFLFKTPARKLVILTLDRLKRGRGPVVVKTVAATLLVVLASSLYSIAKIQRRSLDASVVNPTDQVLVSKHTLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAAKKQSRSFEDGKSVSAAEHKALVEEISGFKAEVEKLESECEVKASKAKTLEAEVEALRKQSEGFLMEYDRLLEDNQNLRSQLQAIDLSPSHAVNKKST* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1197 221 Coils Coil 142 211 - -
Pvu5g1197 221 PANTHER B-CELL RECEPTOR-ASSOCIATED 31-LIKE PROTEIN-RELATED 1 216 - -
Pvu5g1197 221 Pfam Bap31/Bap29 cytoplasmic coiled-coil domain 155 202 IPR041672 -
Pvu5g1197 221 Gene3D - 138 201 - -
Pvu5g1197 221 Coils Coil 107 127 - -
Pvu5g1197 221 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 216 IPR008417 GO:0005783|GO:0006886|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1197 Pvu-Chr5 33506803 33509069 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1197 K14009 - gmx:100790767 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1197 5 33506803 33509069 Pvu5g1197 5 33506803 33509069 ECH
Pvu5g1197 5 33506803 33509069 Pvu11g1052 11 11402213 11404981 PCT