Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1183 ATGGAGCATTCTCTGAATCCTTCTATGGGAAAAGCAGTGTCTGGAAGTGCAAATGAGGAAAGTGGGTGGACTTCATACTTCGAAGATTTTTCTAAGGACACGGAGCAACAAAGTTACTGTTCTAGCTTGGGTGGCTCCTCTTTGGTCTCAGATGCTGCTTCTTCTGCTGCATGGAAACTCTCACATAGCAATCACCTTCTTTCCTACCCTTCTGTTAGAGTTAGAGAATCATCTAATAATGTCTCTAAGAAGCTTCGTTTCAAGAAAACAAGAACCCAACAGATATCAGATGATGATCCTTTGGAAGACACTGCTAGCTCCCCTGTCAATAGTCCCAAGGTAGGGGACTTGAAGATTTCCAGCAAGATCGATGATCAACTTGATGGTTCTACTTCTAGGGGTAAGGGGTTTCACTCAGAGCATTATCCAAACCTGCTGCAGACTGATGAGTGTAAGATAAATTTTAATGGAAACAATGTTGAGTGCACTGAAGACTTGAAGAAAAGGGGTTTATGCCTTGTTCCCTGGTCCATGTTGGTTAATTATTATGGGTGA 555 0.4234 MEHSLNPSMGKAVSGSANEESGWTSYFEDFSKDTEQQSYCSSLGGSSLVSDAASSAAWKLSHSNHLLSYPSVRVRESSNNVSKKLRFKKTRTQQISDDDPLEDTASSPVNSPKVGDLKISSKIDDQLDGSTSRGKGFHSEHYPNLLQTDECKINFNGNNVECTEDLKKRGLCLVPWSMLVNYYG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1183 184 MobiDBLite consensus disorder prediction 80 136 - -
Pvu5g1183 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 183 - -
Pvu5g1183 184 MobiDBLite consensus disorder prediction 118 135 - -
Pvu5g1183 184 MobiDBLite consensus disorder prediction 1 20 - -
Pvu5g1183 184 MobiDBLite consensus disorder prediction 99 114 - -
Pvu5g1183 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 183 IPR039280 GO:0010089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1183 Pvu-Chr5 33171314 33172499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1183 - - gmx:100799390 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1183 5 33171314 33172499 Pvu5g1183 5 33171314 33172499 ECH
Pvu5g1183 5 33171314 33172499 Pvu11g1083 11 12152333 12153296 PCT