Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1182 ATGGCTAACAAAGGTCTCAAGATTTGCTTGGCCTTGTCTCTAGTCCTTCTGATCATTGTTGCAATTGCCACTGTAACCTTATTTTTAACAGTTTTTAAACCCAGGGATCCTGACATCATCGTCCAACCTGTTGGTCTTGAACATTTTGACTTGTCCCTTATGAGCAATTTGACTTCAAATGTGAGTCTGGGAATGGTGATCACTATGGAGAATCCAAACTATGGAAGCTTTGAATACCCCAAAGCCACTGGTTATGTGAATTTTCACGATACCGTTGTGGGTGAAGTTCCAATACAGGGAGAGTCGGTGCCAGCACGAGAGCAGATTACTGTCACCACTTCGGCCAATTTCATGCCACAAAAGTTGGTCGCTGATTCCAATTTTTTTCCAGATGTTCTAACTGGATCGTTGAATTTCACATCAACCGCTGCAATGCCAGGGAAAGTTCGCATGTTCAAGATTTTCAAATTGAAGGCGACGGTTTATTGCACTTGTTACTTTTCCATGAATATAGCCTCTAGTAATGTTAATAGCAATTGCATATCCAAAATCAAGTTTTGA 561 0.41 MANKGLKICLALSLVLLIIVAIATVTLFLTVFKPRDPDIIVQPVGLEHFDLSLMSNLTSNVSLGMVITMENPNYGSFEYPKATGYVNFHDTVVGEVPIQGESVPAREQITVTTSANFMPQKLVADSNFFPDVLTGSLNFTSTAAMPGKVRMFKIFKLKATVYCTCYFSMNIASSNVNSNCISKIKF* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1182 186 Pfam Late embryogenesis abundant protein 67 163 IPR004864 -
Pvu5g1182 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 4 185 - -
Pvu5g1182 186 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 4 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1182 Pvu-Chr5 33141831 33142391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1182 - - pvu:PHAVU_005G114300g 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1182 5 33141831 33142391 Pvu11g1085 11 12212524 12213192 PCT