Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1170 ATGGAGTCTTTTAAGAATCAAATCAAAACCCAAATTCTGATGAAATTCATTTTAGTCTGCTCTTCATTTTTTGCCATTTCTCTGTGTGTATCAGTGCTACTCCTAGCCAAAACAAAGATAGTAGAACTGAGATATTCACCACAACATGATGTGTCAGAGTCTGATCCTACCACTGCTGATCATCTTGTATTTGGAATTGCCTCAACCGGAACTTCATGGCCTTCGAGGAAGCAATACATCAAGCTGTGGTGGAACAGCATACCAAATATAACAATGAGAGGATGTGTTTTCGTAGATGCCCTCCCACATGAAGAAAATGTCAACAATGATGGTTCTCTTCCTCCTCTTTGTGTCTCTCAAGACACTTCCCAGTTTCTCTACACCTACAAGGGTGGTCTACGCTCAGCAATCCGTGTGACACGTGTTGTGAAAGAGACTGTGGCATTGAACCATTCTGGTGTTAGATGGTATGTGTTTGGGGATGATGACACCATTTTCTTCCCTCACAATCTGGTCAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTTGGATCCTACTCAGAGATTTATGAGGGCACCCAGGTTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTCATCACTAGCACAAGTCCTAGCCAAGGTTCTTGATTCATGCATACAAAGGTATCCGCATCTGTATGGAAGTGATTCAAGGGTATACTCTTGCATAACTGAACTAGGTGTGGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGCGGGGAAATATCTTTGGCCTATTGGCTGCTCATCCGTTAACTCCCTTATTGTCCCTACATCATCCAGATCACACTGATCCTATCTTTCCTAACATGTCAACCAAAACATCGCTGCAACATTTATTTGAAGCTGTTCATGTTGATTCTGAGAGGATCCTAGAACAAACAGTTTGTTATGAAAAGCAGTTGTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTGAAGTGTTTCAGAACAATATGCTTTTGCCAGAGGTTCTGAGAGTGGAAAGAACATTCAGACAATGGTTGGTAGGAAATGTTTTGAGAGGAATATATAATTTCAATACAAGAGAAGTTCACCCTGATCCATGTAAAAGAGGCACCATCTTCTATCTAGATAAAGTGTCTTCTGGGAAAGATGGTATCATAAGCAGTTACAAGAGAGATTTTCAAAATTGTTCCTACGAGGCATCGATGAGTAAATTGGAAGTGATCAAAGTGGTGACAAATAAGTTACACCTTGACAACAAACAGACTCCAAGACGACACTGTTGTGATGTGTTGCCCTCTAATGCTGGTAACATGATGGAAATTGCAATCAGAGAGTGCAATTATGAAGAACTGATTTATATGAACTGA 1413 0.4055 MESFKNQIKTQILMKFILVCSSFFAISLCVSVLLLAKTKIVELRYSPQHDVSESDPTTADHLVFGIASTGTSWPSRKQYIKLWWNSIPNITMRGCVFVDALPHEENVNNDGSLPPLCVSQDTSQFLYTYKGGLRSAIRVTRVVKETVALNHSGVRWYVFGDDDTIFFPHNLVKTLSKYDHRLWYYVGSYSEIYEGTQVFGFGMAFGGGGFAISSSLAQVLAKVLDSCIQRYPHLYGSDSRVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPLTPLLSLHHPDHTDPIFPNMSTKTSLQHLFEAVHVDSERILEQTVCYEKQLSWTISVSWGYAVEVFQNNMLLPEVLRVERTFRQWLVGNVLRGIYNFNTREVHPDPCKRGTIFYLDKVSSGKDGIISSYKRDFQNCSYEASMSKLEVIKVVTNKLHLDNKQTPRRHCCDVLPSNAGNMMEIAIRECNYEELIYMN* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1170 470 Gene3D - 50 310 - -
Pvu5g1170 470 PANTHER FRINGE-RELATED 8 468 - -
Pvu5g1170 470 Pfam Protein of unknown function, DUF604 198 443 IPR006740 -
Pvu5g1170 470 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 8 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1170 Pvu-Chr5 32991564 32993418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1170 12 436 Glycosyltransferase AT1G05280 51.039 2.13e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1170 - - gmx:100779943 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1095 11 12446782 12447859 Pvu5g1170 5 32991564 32993418 PCT