Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1121 ATGAGTTCTACAAGCCGTGCTTGGACTTGGACCGTGGCTGCAAGTGTTGGAGTGGTGGAGGCCTTGAAGGACCAGGGCATCTGCAGGTGGAACAGCGTGTTGAGATCAGCACAGCAACATGCTAAACATAATATGAGGTCTTTGTCTCACACCAGTAAACTTTCTTCTCAGTCATCTGCCATGGCTTCGGCAAAATTCAAAGATGAAAAAGCTCAGCAGTCAGAGGAATCTTTGAGAACTGTTATGTACTTGAGTTGCTGGGGTCCCAACTAA 273 0.4725 MSSTSRAWTWTVAASVGVVEALKDQGICRWNSVLRSAQQHAKHNMRSLSHTSKLSSQSSAMASAKFKDEKAQQSEESLRTVMYLSCWGPN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1121 90 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 90 IPR022251 -
Pvu5g1121 90 MobiDBLite consensus disorder prediction 41 71 - -
Pvu5g1121 90 MobiDBLite consensus disorder prediction 41 63 - -
Pvu5g1121 90 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 90 - -
Pvu5g1121 90 Pfam Wound-induced protein 12 89 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1121 Pvu-Chr5 31687587 31687859 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1121 - - gmx:100500480 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1121 5 31687587 31687859 Pvu5g1121 5 31687587 31687859 ECH
Pvu5g1121 5 31687587 31687859 Pvu11g1140 11 14321044 14321620 PCT
Pvu11g1141 11 14328726 14330021 Pvu5g1121 5 31687587 31687859 PCT