Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1114 ATGCGGCGAAGAGCGACGGATTTTCGCAGGCCAGTGCGTAGGAAGGTTCCAGATGCTTTTTGGTGGGCATTGTGCTGTGCAGTGATTCTTCTCTTTGTGTATATTCTGAGCAAAGGGAACAAAATTGAGTCCAGACCCGCTTTGTCCAAGAAAACTTACAAGCATGATAAGATTATGGAAGGCCTTAATATTACTGAAGAGATGTTGAACTCTAACTCGGTTGCGAGACAACTCAATGATCAGATATCTCTGGCAAAAGCTTTTGTAGTAATTGCCAAAGAAAGTAACAACCTCCAATTTGCATGGGAATTAAGTGCCCAGATCCACAATTCACAGATGCTCCTCTCAAATGCTGCCACTAGGCGTGTTCCTTTGACAACCAGGGAAACAGAAAGGGCTATCCGTGATATGGCATTATTGTTATACCAAGCCCAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAGCTCTTGAGGAACAGATGAATTCTGTTACTGAAAAGAGTTCGAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGTCTTTACTGCCTTGGTGTTCGGTTGACAAGAGAATGGTTCAGAAACTTTAATTTGCAAAAGAAATTGAAGGACGATAGACAAATGGAGATGAAGCTCAAGGATAACAATCTTTACCACTTTTGTGTTTTCTCTGATAACATTCTTGCTACTTCAGTTGTGGTCAATTCAACTGCAGTGAATTCTAAAAATCCCAATATGGTTGTTTTTCACCTTGTCACTGATGAAATAAACTATGCTGCGATGAAGGCATGGTTTGCCGTGAATGATTTCCATGGGGTGACTGTGGAAGTTCAGAAGTTTGAAGACTTTACTTGGTTAAATGCATCATATGTTCCTGTTCTCAAGCAACTTCAAGACTCTGAAATACAGAGCTACTACTTTTCTGGCAACAGTGATGATGGAAGAACACCTATCAAGTTTCGTAACCCTAAATATCTATCCATGCTTAATCACCTTAGGTTCTACATACCTGAAGTTTTTCCTGCACTAAAGAAGGTGGTGTTCTTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGGTCTTTTTTCCATCGATTTGAAGGGTAATGTAAATGGAGCTGTTGAAACATGCATGGAGACATTTCACAGATACCATAAATATTTGAACTACTCTCATCCTCTTATACGTGCACAATTTGACCCTGATGCTTGTGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAACGTAACTGGCATTTACCACCACTGGCAGGAAAAGAATGTTGACCGAACATTGTGGAAACTTGGTACCTTGCCGCCTGGACTGTTGACATTTTATGGATTAACTCAGCCCTTAGATCCATCGTGGCACGTTTTGGGTTTTGGCTACACCAATGTTGATCCTCAGTTGATAGAGAGGGGAGCTGTGCTACATTTCAATGGGAATTCCAAACCATGGTTGAAGATTGGGATAGAGAAGTACAAGCCCCTATGGGAAAAATATGTTGAATACTCTCATCCTTTATTGCAGCAGTGTAACTTCCACTGA 1602 0.407 MRRRATDFRRPVRRKVPDAFWWALCCAVILLFVYILSKGNKIESRPALSKKTYKHDKIMEGLNITEEMLNSNSVARQLNDQISLAKAFVVIAKESNNLQFAWELSAQIHNSQMLLSNAATRRVPLTTRETERAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTREWFRNFNLQKKLKDDRQMEMKLKDNNLYHFCVFSDNILATSVVVNSTAVNSKNPNMVVFHLVTDEINYAAMKAWFAVNDFHGVTVEVQKFEDFTWLNASYVPVLKQLQDSEIQSYYFSGNSDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSIDLKGNVNGAVETCMETFHRYHKYLNYSHPLIRAQFDPDACGWAFGMNVFDLVEWRKKNVTGIYHHWQEKNVDRTLWKLGTLPPGLLTFYGLTQPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKYVEYSHPLLQQCNFH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1114 533 CDD GT8_like_1 228 520 - -
Pvu5g1114 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 528 IPR029044 -
Pvu5g1114 533 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 3 533 - -
Pvu5g1114 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
Pvu5g1114 533 Coils Coil 155 175 - -
Pvu5g1114 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 533 IPR029993 GO:0047262
Pvu5g1114 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1114 Pvu-Chr5 31627036 31630582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1114 1 533 Glycosyltransferase AT2G20810 79.478 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1114 K13648 - gmx:100792018 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1114 5 31627036 31630582 Pvu5g1114 5 31627036 31630582 ECH
Pvu5g1114 5 31627036 31630582 Pvu11g1151 11 14641038 14643820 PCT