Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1070 ATGTGCACAGCCATCGACACTGAATTCCGCATGTTTCCCGTTTCTGTTCCCAACTCCGGTGGACTATTCGTGAGTCTTTCCGACACCGTTTTTGGCTTTTGGGAGGATCTCCGGGACCCGTCGGAGAATTCATCCATCTACGGCGACCTTCTTGATGAGGACGATGGCAATCTTTGTTCTATGGAAAACAATCACAAAGCTTTCTGGGAAGAACAATACCACCTTCTCCAGGCAAGTTTATACAGAAGTAGCTCAATTGAGACAAGAGTTGGGCAAGCTACAAGGGAAGCTCTGAAAGAGTTAAATATGTGGGATATGCAGTGCCTTTGCCGGAGAGAATTGAATGTTAAGAGCTGTCTGAATTGTTTGAGGAGGGAAATATGTGATCGTTTGTTGAACCTTGGTTACAATTCTGCTATTTGCACATCTAAATGGAGGACTTCCTCGGAAATCCAAATATCAGGGGAGCATAGTTATCTGGAAGTGATGGACAACTCAAACACAAAAAGAGAAGTAACAAAAGTGGTAATTGAATTGAATTTTCGAGCAGAATTTGAGATGGCACGTGCTAGTGAAGAGTACAACAGATTAATTACTAGGTTACCAGAGGTGTTTGTTGGAAAAGCAGAGAGGTTACGAGTCATAATTAATATTATGTGCTCAGCTGCAAAAAAAAATATGAAGGAAAAGAAAATGCACTTAGGACCTTGGAGGAAACAAAGGTACATGCAAGCAAAGTGGCTTGGTATGACAGATAGAGACATGACAGTGCCACTTCCCACTGTTTACAAATCACGACCACGAAAATATAAGGCTTCAATGCTCACTTGCGATTTAGTAGAAAATATTCCTGGGCATCACTGTGTTGTACTTTGCTGA 879 0.4187 MCTAIDTEFRMFPVSVPNSGGLFVSLSDTVFGFWEDLRDPSENSSIYGDLLDEDDGNLCSMENNHKAFWEEQYHLLQASLYRSSSIETRVGQATREALKELNMWDMQCLCRRELNVKSCLNCLRREICDRLLNLGYNSAICTSKWRTSSEIQISGEHSYLEVMDNSNTKREVTKVVIELNFRAEFEMARASEEYNRLITRLPEVFVGKAERLRVIINIMCSAAKKNMKEKKMHLGPWRKQRYMQAKWLGMTDRDMTVPLPTVYKSRPRKYKASMLTCDLVENIPGHHCVVLC* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1070 292 PANTHER DUF506 FAMILY PROTEIN 25 289 - -
Pvu5g1070 292 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 124 254 IPR006502 -
Pvu5g1070 292 PANTHER OS03G0796600 PROTEIN 25 289 IPR006502 -
Pvu5g1070 292 Pfam PDDEXK-like family of unknown function 28 253 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1070 Pvu-Chr5 30881978 30884320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1070 - - cam:101507941 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1070 5 30881978 30884320 Pvu5g1070 5 30881978 30884320 ECH
Pvu5g1070 5 30881978 30884320 Pvu11g1228 11 19745057 19746200 PCT