Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0965 ATGGATGCTGCAAGTGCTGCTCCTTTGCATATAGCAATATTTCCTTGGTTTGCTATGGGACACCTCACCCCTAATCTTCACCTCTCCAACAAGTTAGCAGAGAGAGGCCACAGAATCTCCTTTATAGTCCCACAAAGAACACAAACCAAACTACACCACCTCAATCTCCACCCTCATCTCATCACCTTTATCCCCATCAAGCTTCCTCATGTTCATGGCCTTCCTCACCATGCTGAGACCACTTCAGACGTCCCCTTCTCTTTATTCCCACTTCTTACCACCGCCATGGATCGCACACAGAAGGACATTGAACTTCTCCTCAGGGATCTCAACCCGCAAATTGTTTTCTTCGATTTCCAACATTGGCTACCCAACTTGTCTCGGAGCCTAAGCATCAAGAGTGTCATGTACCTCATACTTCACCCATTATCCTCAGCATACCTTGTAGAAGATCCAAGACGAAGCCAAGGAAGAGAGTTAACTGAACTTGATCTAATGGAACCTCCTCCGGGGTTCCCTGATTCATGCATCAAGTTTCAGCCACATGAACTTCGGTGCCTCGTTGAAATAAGGAAATTGGAGTTTGGAAGTGGTGTTCTCCTGTACGATCGGGGATACAAAGGTTTCTGCTCGGCGGATGCAATTGGATTCAAAGGTTGCAGAGAAATTGACGGGCCATATGCTGAGTATCTTCAAACTGTGTATGGGAAGCCTGTTTTACTTTCGGGGCCACTTTTACCTGAGCCACCAAACACCACTTTAGAGGAAAAATGGGCTTCGTGGCTTGGGGGATTCAACCCGGGTTCCGTTATTTTCTGTGCTTATGGAAGCGAAAGCCCGTTACCACAAAATCAGCTCCAAGAGTTGTTGCTTGGTCTTGAATTAACAGGTTTTCCATTTCTCGCAGCACTTAAGCCCCCTGATGGATTTGAGTCTATTGAAGAAGCTCTGCCAGAAGGATTTGGAGAAAGGGTTAAAGGAAGAGGAATTGCATATGGAGGTTGGGTTCAGCAACAACTGATTTTGGGACACCCTTCTGTTGGGTGCTTCATAACACACTGTGGAGCTGCTTCTGTGACAGAAGCGCTTGTTAACAAGTGTGGGTTGGTGCTGCTACCACGGCTTGGTACTGATCATATCATGAATGCAAAGATGTTGAGTATGATCTTAAAGGTTGGAGTGCAAGTGGAGAAAGGTGAAGAAGATGGGTTGTTCACAAAAGAAAGTGTATGCAAAGCTGTGCAAACTGTTATGGAAGATGGGAATGTGGTTGGCAGAGAAGTCAGAGAAAATCATGCCAAACTCAGGAATTTCTTACTAAGTGACAATCTAGAATCGTCATGTGTTGATAGGTTCTGTCAACAACTACAAGATATTTGTTATAAGAGTCCTTATATCAACCCAACAATGAATTGCTCCTCTGCTTAG 1428 0.4503 MDAASAAPLHIAIFPWFAMGHLTPNLHLSNKLAERGHRISFIVPQRTQTKLHHLNLHPHLITFIPIKLPHVHGLPHHAETTSDVPFSLFPLLTTAMDRTQKDIELLLRDLNPQIVFFDFQHWLPNLSRSLSIKSVMYLILHPLSSAYLVEDPRRSQGRELTELDLMEPPPGFPDSCIKFQPHELRCLVEIRKLEFGSGVLLYDRGYKGFCSADAIGFKGCREIDGPYAEYLQTVYGKPVLLSGPLLPEPPNTTLEEKWASWLGGFNPGSVIFCAYGSESPLPQNQLQELLLGLELTGFPFLAALKPPDGFESIEEALPEGFGERVKGRGIAYGGWVQQQLILGHPSVGCFITHCGAASVTEALVNKCGLVLLPRLGTDHIMNAKMLSMILKVGVQVEKGEEDGLFTKESVCKAVQTVMEDGNVVGREVRENHAKLRNFLLSDNLESSCVDRFCQQLQDICYKSPYINPTMNCSSA* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0965 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 335 421 IPR002213 GO:0008194
Pvu5g0965 475 Gene3D Glycogen Phosphorylase B; 261 439 - -
Pvu5g0965 475 PANTHER GLYCOSYLTRANSFERASE 5 458 - -
Pvu5g0965 475 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 5 458 - -
Pvu5g0965 475 CDD GT1_Gtf-like 9 436 IPR002213 GO:0008194
Pvu5g0965 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 441 - -
Pvu5g0965 475 Gene3D Glycogen Phosphorylase B; 3 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0965 Pvu-Chr5 27688626 27690243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0965 9 459 Glycosyltransferase AT5G53990 45.395 5.14e-140 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0965 K22794 - gmx:100808439 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0965 5 27688626 27690243 Pvu11g1437 11 32937479 32939130 PCT