Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0956 ATGGAGGAGCTACTTGTAGCAGCACTCTCGATGCTTCTCGTCGTAGCGTTGATTCCACTCTACCTATGGAAGCGACGTCAGGATTCTCAGCCTCCACCTCACCGCGACGAACCTCCTCAGGCTCCGCGGAGAGAAACCGTGGTGCGCGCCACCGCCACTCGTCGTATGCGTCGCCGACCTGCCGCGTCTGGAGCTAGCACGTCGAGAGATCCACCTGCGGCGTTAGAAGAATCTGCTGGTGAGAGTGAGGATGAAATTGCTGGTGAAGGGTATTATGAGGCTAAAGCATCAAAGAAAAAGGAAATCAAAAGGCAAGAGAGGGAAGCACGGCGTCAGGCTGATGAAGCTGCACGAGAGTCAAAGCAGACAAAACAAGATCGTTATTCAGAAATTCGAAGGTTGAAGGATGAGGAGCGTGAGGCACAGGAGCGTATGTTGGAAGAGGAAGCCAAAGCTCAGAAGGCTAAGGAGGAGGAGGCTGCTGCATTGGAGTTTGAGAAGTGGAAAGGTGAATTTTCAGTTGATGATGAAGGTACCCTTGAAGAAGTGCAGGATAGTGCTGAAGACTTGCTAGCCAATTTTGTTGAATATATAAAGAAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGAACACAGGAATGTATCAATCGTATCACATCGCTGGAAAGTATGGGTCGGCTTTCGGGTGTTATGGATGACAGAGGGAAATTTATATACATCTCCCAAGAAGAGATGAATGCTGTTGCTGATTATATTAAGCGGCAAGGGAGAGTTAGCATTTCCCACTTGGCAAGTAAATCAAACCAGTTCATTGATTTAGAGCCTAAAGCTCAGTACACCGACGACATTAATATTGGGGAGGAGATAACTGTCAACTGA 897 0.476 MEELLVAALSMLLVVALIPLYLWKRRQDSQPPPHRDEPPQAPRRETVVRATATRRMRRRPAASGASTSRDPPAALEESAGESEDEIAGEGYYEAKASKKKEIKRQEREARRQADEAARESKQTKQDRYSEIRRLKDEEREAQERMLEEEAKAQKAKEEEAAALEFEKWKGEFSVDDEGTLEEVQDSAEDLLANFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMNAVADYIKRQGRVSISHLASKSNQFIDLEPKAQYTDDINIGEEITVN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0956 298 MobiDBLite consensus disorder prediction 27 141 - -
Pvu5g0956 298 Pfam DDRGK domain 96 277 IPR019153 -
Pvu5g0956 298 MobiDBLite consensus disorder prediction 88 141 - -
Pvu5g0956 298 Coils Coil 180 200 - -
Pvu5g0956 298 Coils Coil 92 166 - -
Pvu5g0956 298 Gene3D - 189 246 IPR036388 -
Pvu5g0956 298 SUPERFAMILY "Winged helix" DNA-binding domain 185 254 IPR036390 -
Pvu5g0956 298 SMART DDRGK_2 94 278 IPR019153 -
Pvu5g0956 298 MobiDBLite consensus disorder prediction 28 52 - -
Pvu5g0956 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 94 294 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0956 K23344 - gmx:100810584 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0956 5 27379939 27386585 Pvu5g0956 5 27379939 27386585 ECH