Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0952 ATGGATTATGAACCTCCATTTTTTGATGTCTACAAGCCCCTCCTTCTACAAAACTCGCACGCTGTTGGTGTTGATGTTGGTGGCAGTGGCATAAGAAACGACAAATCCGAGTGGTGTGAGCTTCCTCTAATTGATCTAAGCCGGTTAAGCCTGGACCATGTTGAGAGGGAGGAGTGCATGAAAGAAATAAGTGGAGCTGCGAGAACGTGGGGGTTTTTCCAGGTTCTGAATCATGGGGTTTCACAAGAACTGCTTCACAATCTGCGGCATGAGCAAATGGACGTGTTCCGCAACCCTTTTGCAACAAAATCCAGAGAAAATTTCTTGAATTTACCTCCCAGAAGTTACAGGTGGGGCAATCCATTTGCCACAAACTGGAGCCAAATTTCATGGTCAGAAGCCTTCCACTTGTTTCTTCCAGATATAGCTAGGATGGAGGACCAGCACCAAAGTCTCAGATCAAGTATTGAGGCTTTTGCATCTGTAGTTGCTCCACTGGCAGAAAGCTTAGTGCAGATTCTTGCTCAGAAACTGAACATCAAATTCAGTTATTTCCAAGAGAATTGTTCAGCAAACACTTGCTTTCTTCGGCTGAACAGATATCCACCATGTCCACTCCATTCAAGGGTGTTTGGCCTCTTACCTCACACTGACTCTAGTTTCCTCACTATACTGAACCAAGACCCTATTGGGGGGTTGCAATTAATGAAAGATGGAAAGTGGATCGGTGTCAAACCTAACCCTCAAGCACTTGTTGTTAATATTGGTGATTTATTCCAGGCAGTGAGCAATGACATGTACATAAGTGCTAAACACCAGGTGGTGGGAGGTGAGAAGGAAGAGAGGTTCTCAGTGGCATATTTCTATAACCCTAGGAAAGATGCAGTGATAGAGAGCGAGATGATGCCAGCAGTGTACAGAAAGTTTAGTTTTAGAGAGTACAGAGAGCAGATAGAGAAAGATGTTAAGGAAACAGGTGATAAAGCAGGGCTCTCTAGGTTTCTCTTGTAG 1011 0.4431 MDYEPPFFDVYKPLLLQNSHAVGVDVGGSGIRNDKSEWCELPLIDLSRLSLDHVEREECMKEISGAARTWGFFQVLNHGVSQELLHNLRHEQMDVFRNPFATKSRENFLNLPPRSYRWGNPFATNWSQISWSEAFHLFLPDIARMEDQHQSLRSSIEAFASVVAPLAESLVQILAQKLNIKFSYFQENCSANTCFLRLNRYPPCPLHSRVFGLLPHTDSSFLTILNQDPIGGLQLMKDGKWIGVKPNPQALVVNIGDLFQAVSNDMYISAKHQVVGGEKEERFSVAYFYNPRKDAVIESEMMPAVYRKFSFREYREQIEKDVKETGDKAGLSRFLL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0952 336 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 291 IPR005123 -
Pvu5g0952 336 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 139 IPR026992 -
Pvu5g0952 336 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 8 329 - -
Pvu5g0952 336 Gene3D - 39 332 IPR027443 -
Pvu5g0952 336 SUPERFAMILY Clavaminate synthase-like 35 318 - -
Pvu5g0952 336 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 329 - -
Pvu5g0952 336 Pfam 2OG-Fe(II) oxygenase superfamily 195 291 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0952 Pvu-Chr5 26407504 26410933 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0952 40 316 Glycosyltransferase AT5G59530 31.650 2.10e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0952 - K04125 gmx:100790757 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0952 5 26407504 26410933 Pvu5g0952 5 26407504 26410933 ECH