Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0944 ATGCAGCTGCACATATCTCCAAGTTTGAGGCATGTCACTGTGTTTCCAGGCAAAGGGTTCAAGGAGTTTATCAAAGTGAAGGTTGCATCAAGGCGTGTCTCTTATCGGATGCTCTTCTATTTTCTCTTGTTCTTCACTTTTCTTCTTCGGTTTGTGTTTGTCTTAACAGCAGTGGATGGCATTGATGGAGAAAACAAATGCTCTACCATAGGTTGCCTAGGAAAAAAACTAGGACCAAGGATTTTGGGGAGACGGTCTGAATCAACTGTCCCAGAAGTGATATACCAAACATTAAATGAACCTCTTGGCAAACTTGAACTTCAGGGTAGATTTGATATTCCACAAACCTTAGAAGAGTTCATGACTGAAATGAAGAGTGGTGGATATGATGCCAAGACATTTGCAATTAAACTTCGAGAAATGGTGACCCTTATGGAAGAAAGGACCAGAATGGCCAAGATCCAAGAATATCTGTATCGACATGTAGCATCAAGCAGTATACCAAAACAACTTCACTGCCTTTCCTTGAGTTTGGCCAATGAACACACCAACAACGCCGCAGCACGCCTTCAGCTCCCCTCTGCAGAACTAGTCCCTGCCCTGGTTGACAATTCCTACTTCCATTTTGTCCTTGCCTCAGACAATGTGCTGGCTGCATCAGTGGTTGCAACATCGCTTGTTCGCAACTTTTTGAGACCTCAGAAGGTTGTTCTGCACATAATTACAGACAGGAAGACTTATTACCCCATGCAGGCTTGGTTCTCATTGCATTCTTTGTCTCCTGCTATAATTGAGGTGAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTGCCTGTTCTGGAAGCCATGGAGCAGGATCAAAAGGTGAGGTCACAGTTTAGAGGGGGATCATCAGCTATAATTGCAAATACAACTGAGAAGCCAAAAGTTATTGCAGCAAAACTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATCCGGATACATCTCCCAGAGTTGTTTCCTAGTCTTAACAAGGTGGTCTTCCTCGATGATGACATCGTTGTACAAACTGATCTTTCACCTCTGTGGGACATTGAAATGAATGGAAAAGTGAATGGAGCTGTAGAAACATGTACAGGAGAAGATAAGTTTGTGATGTCAAAGAAGTTGAAAAGCTATTTGAACTTCTCCCACCCTCTAATATCCAAAAATTTTAATCCCAATGAATGTGCCTGGGCCTATGGCATGAACATTTTCGATTTGGAGGCTTGGCGGAAGACTAATATAAGCAATATTTACCATTACTGGGTTGAGCAGAATATCAAATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGCCATGTCCACGTTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAGGAAAATACAAGTTTTGTTGATGCTGAGAGTGCTGGTGTCGTCCATTACAATGGCAGGGCAAAGCCATGGCTAGAAATAGCTTTTCCACAACTAAGTAAATTGTGGACGAAGTATGTTGACTTCTCAGATAAGTTCATCAAAAGTTGTCACATTAGGGCATCATAG 1602 0.4238 MQLHISPSLRHVTVFPGKGFKEFIKVKVASRRVSYRMLFYFLLFFTFLLRFVFVLTAVDGIDGENKCSTIGCLGKKLGPRILGRRSESTVPEVIYQTLNEPLGKLELQGRFDIPQTLEEFMTEMKSGGYDAKTFAIKLREMVTLMEERTRMAKIQEYLYRHVASSSIPKQLHCLSLSLANEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNFLRPQKVVLHIITDRKTYYPMQAWFSLHSLSPAIIEVKALHHFDWFTKGKVPVLEAMEQDQKVRSQFRGGSSAIIANTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIEMNGKVNGAVETCTGEDKFVMSKKLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRKTNISNIYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFVDAESAGVVHYNGRAKPWLEIAFPQLSKLWTKYVDFSDKFIKSCHIRAS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0944 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 527 IPR029044 -
Pvu5g0944 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Pvu5g0944 533 Pfam Glycosyl transferase family 8 206 506 IPR002495 GO:0016757
Pvu5g0944 533 CDD GT8_like_1 207 519 - -
Pvu5g0944 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Pvu5g0944 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0944 Pvu-Chr5 26097951 26101414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0944 1 533 Glycosyltransferase AT5G54690 79.065 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0944 K20867 - gmx:100802623 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0944 5 26097951 26101414 Pvu5g0944 5 26097951 26101414 ECH
Pvu5g0944 5 26097951 26101414 Pvu11g1465 11 33726459 33729897 PCT