Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0940 ATGAACCATCTTTCTGTCTCACACTTCACTCATTTGAGTTCCTTAATCACCATGGCTCCTTTCACAAACTTGCATGGAGGAGTCTCCAAAACCTTAATACCCCTCACATGTCTTCCAAATGCACACAATAGCATAAAAAGAGGACAAGTAGTTGGATTTCTTGGAAGCAAAACACAAGAGGAACCATCAGAATGTCCAGTTCAAGCCACAAGAAGAGCAGCAGCAATAGGGCTTGCCACTCTAGTGCTCACATGGCCATTCAATGACAAGATTTCATTAGCCAAAGATAATGGTTTCTGGGTTGAAGATCACCCTCTTCCTCGACTAACTGTCACTAACAATATTGCAAATGAGAAAACGGGGACACGTTCTTTTCTTAAAAGGGGATTGTTCATGCCAAATATTGGACTGAAAGGAAGTGTGCAAAGGATAAAGCATTATTCCTTTGATCTTCTAGCGATGGCAGATTTGGTACATGCAGACACACTCAACTATGTGAGGAAGTACCTAAGACTCAAGTCTACCATCATATACTATGATTTTGACAAGCTTATCTCTGCCACTCCAGTGGATGATGAAAAGCAGCAACTAACTGATATGGCTAACAAATTGTTTGATAATTTTGAAAGGCTTGAAGAAGCTTCAAGGAATAAAAGTCTACCTGAGACACAATCATGCTATCAGGAAACTGAAGTTTTGCTTAGAGAGGTCATGGACCGGATGGATGTACTGTACGAAACAATTTGA 747 0.4043 MNHLSVSHFTHLSSLITMAPFTNLHGGVSKTLIPLTCLPNAHNSIKRGQVVGFLGSKTQEEPSECPVQATRRAAAIGLATLVLTWPFNDKISLAKDNGFWVEDHPLPRLTVTNNIANEKTGTRSFLKRGLFMPNIGLKGSVQRIKHYSFDLLAMADLVHADTLNYVRKYLRLKSTIIYYDFDKLISATPVDDEKQQLTDMANKLFDNFERLEEASRNKSLPETQSCYQETEVLLREVMDRMDVLYETI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0940 248 SUPERFAMILY Oxygen-evolving enhancer protein 3, 131 241 IPR023222 -
Pvu5g0940 248 Gene3D - 101 242 IPR023222 -
Pvu5g0940 248 Coils Coil 194 214 - -
Pvu5g0940 248 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 50 241 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Pvu5g0940 248 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 18 241 - -
Pvu5g0940 248 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 18 241 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0940 K08901 - gmx:100814163 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0940 5 26046382 26048161 Pvu5g0940 5 26046382 26048161 ECH