Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0922 ATGCCTGAGGCTCCCAGAGACTCCAACATAGAGCATGACCTTGCTGAGAAAAACAGGGAGATTCTGAACTTCATAGAGGATGTGACTGCTAACGCAGATGAAGTTCAGAAGAGGGTTCTTTCTGAAATTCTGTCCCGCAATGCAAACGTTGAGTACCTGCGACGACATGGTTTGAATGGCCAAACGGACCGTCACACCTTCAAGAAGCTTCTCCCTGTCATTACCTACGAGGATGTCCAACCTGACATTAACCGCATCGCCAATGGTGACACCTCTCCAATTCTCACCTCCAAACCCATCACCGAGTTTCTCACCAGCTCTGGAACATCAGGGGGTGAGAGAAAGTTGATGCCAACAATTGAGGAGGAGCTAGGGAGGAGGTGTGTGTTGTACAGTCTGTTGATGCCAATAATGAGCCAGTTTGTTGCAGACCTTGAAAAAGGAAAAGGAATGTATTTGATGTTCGTAAAATGTGAGTCCAAAACACCTGGAGGAATAGTAGCTCGTCCAGTTCTCACAAGCTATTACAAGAGCCCCTACTTTAGGGATAGACCCTACGACCCTTACACAAACTACACAAGCCCAAATCAGACCGTCCTCTGTCCTGATTCCTACCAAAGCATGTACTCCCAACTCCTATGTGGCCTTAGCCAAAACAAAGAGGTTCTCAGAGTGGGGGCCATCTTTGCTTCTGGCTTCATTCGTGCCATTCGGTTCCTGGAGAAACACTGGACCCTCCTTTCCAATGATATCAGAACAGGAACTTTGAACCCTTTGATCACTGACACGTCAGTCAGAGAGGCTGTAATGAGGATCCTGAAGCCTGATCCCAAACTTGCTGATATGATTCACAAGGAGTGTAGCAAGGGGTCTTGGCAGGGGATTATTACCAGGCTTTGGCCCAATACAAAGTATGTGGATGTTATTGTGACTGGGACTATGGCACAATACATTCCCACTTTGGATTACTATAGCAATGGCCTCCCACTGGTGTGCACCATGTATGCTTCTAGTGAGTGTTACTTTGGGGTCAACCTCAACCCTCTTTGCAAACCTACCCAAGTGTCTTACACCCTCATCCCCACCATGTGCTACTATGAATTCCTACCCGTCAACCGAACCACTGACCTCACTCTACCTTCTAGACCAACACCAACATCTCTCAATCATACACAACACCAACAATTGCTGGAGCTTGTTGATGTCAAGCTTGGTCAAGAATATGAGCTCGTTGTTACAACTCATGCTGGACTTTATAGGTATAGAGTGGGAGATATACTAAGAGTGACAGGATTCAAGAACAAGGCCCCACAATTTAGCTTTGTATGCAGAAAGAACGTTGCCCTGAGCATAGATTCTGACAAGACTGATGAGGTTGAGCTACAAAACGCAATGAAGAATGCAGTGACACACCTGGTGCCATTTGATGCACTGGTGAGTGAGTACACAAGCTATGCCGACACCACCACAATCCCGGGACACTATGTCTTGTATTGGGAGCTAAGCCTCAAAGGGTCAACTCCTATTCCACCCTGCGTGTATGAAGATTGTTGTCTAACAATGGAGGAGTCACTCAACAGTGTGTATCGCCAGGGTCGTGTCTCAGACAAATCAATAGGACCCCTTGAGATCAAGATTGTGGAACAGGGCACCTTTGACAAACTCATGGACTATGCCATTAGCTTAGGGGCATCTATTAACCAGTACAAGGCACCAAGGTGTGTCAAGTTTGCTCCTATAGTGGAATTGTTGAACTCAAGGGTAACATCCAACTATTTTAGTCCTAAGTGTCCTAAGTGGGTTCCGGGACACAAACAGTGGATTCATTGTAATTGA 1836 0.4641 MPEAPRDSNIEHDLAEKNREILNFIEDVTANADEVQKRVLSEILSRNANVEYLRRHGLNGQTDRHTFKKLLPVITYEDVQPDINRIANGDTSPILTSKPITEFLTSSGTSGGERKLMPTIEEELGRRCVLYSLLMPIMSQFVADLEKGKGMYLMFVKCESKTPGGIVARPVLTSYYKSPYFRDRPYDPYTNYTSPNQTVLCPDSYQSMYSQLLCGLSQNKEVLRVGAIFASGFIRAIRFLEKHWTLLSNDIRTGTLNPLITDTSVREAVMRILKPDPKLADMIHKECSKGSWQGIITRLWPNTKYVDVIVTGTMAQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPTQVSYTLIPTMCYYEFLPVNRTTDLTLPSRPTPTSLNHTQHQQLLELVDVKLGQEYELVVTTHAGLYRYRVGDILRVTGFKNKAPQFSFVCRKNVALSIDSDKTDEVELQNAMKNAVTHLVPFDALVSEYTSYADTTTIPGHYVLYWELSLKGSTPIPPCVYEDCCLTMEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKAPRCVKFAPIVELLNSRVTSNYFSPKCPKWVPGHKQWIHCN* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0922 611 Pfam GH3 auxin-responsive promoter 25 576 IPR004993 -
Pvu5g0922 611 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 10 608 IPR004993 -
Pvu5g0922 611 PANTHER - 10 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0922 Pvu-Chr5 24818923 24821491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0922 13 594 EF-hand Containing Proteins AT1G23160 49.746 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0922 K14487 - gmx:100797120 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0922 5 24818923 24821491 Pvu5g0922 5 24818923 24821491 ECH