Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0881 GATCTGGATGAGTTCAAAACCATCCTTAAACCACGTCTAAAATTAATTGTCCAAAATGACGAAAGGGAGTGGTTTGTTGTATTTGTATCAAAAGCTCACCCAGCTAACGATCAGGCAAACAAAATGGCAAAGAAAGTATATGCCAGACTCGAAGTGGAGTTTAATACCAAAAAAAGAGAAAGATGTTGCAAATATGATATACATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACGCTGGATAGACGTGTACAATTTTATGAGGATGAAATACGAAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGCAATTTTTTTATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCCCACCTTCATGATGATGCATTACGGGAATATGATGAGCTGGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAGAGAGATTTTGGAGGGGCTGATCATGGTGATGATCAGGCAGCATTGGTTAATACAAGAAATAAACCATTGACACAGATGGTTCAAGAGGATTCATTTAGGGAGTTTGAATTCAGACAGTATCTATTTGCATGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCCCATTGAGGCTGCAACACGAGGCTATTCATTCATAATAAGCTTCTCTAAATCCTTGTCATTGCATGAGCGTATTCTGCCATTTTGTATGCGTGAAGTCTGGGTAGCAACTGCTTGCTTGTCTTTAATTGAAGCAACCACTTCAAATTATACTGATGGACATGTGGCGCCTGATATAGAGAAGGAGTATTTTCGTCTTCTGGGTGACCTATACTCTCTATCTAGACTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTTTGGAACTGATATAGAAAGAAGCCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTTTGGCCTTCACTTCCTGCTGACGCATCTGCAGAGGTGCTTGAGAAAGAAAAGCTTATTCTCCAAACAACTTCCAGAACCAAGCACTTTGGTATCCAAAGGAAACCCCTGCCCCTTGAACCTACTGTTCTTCTGCGAGAGGCCAACAGGCTTAGGGCTTCACTTTCAGCTGGAAATGCGTCTGAAATGTTTGACAATCGCCAGGGTCCATTGGATGGATCAGGTTTCGATGCATCTACAAGAATATCACCACACAAAGCACCTGCAAATTCTATGTCACGTACAAATTCATCACCAGGAAACTTTGATAGTTCAATTGACCGACCAATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAGCAAACCATTTCCAATCCAGAACTGTTGAAATCGTTATCATCATCTGAGGAATTTGAGCACAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTGTTGCTTTTAAGCATGGGAATTTTGATCAGGCTGCAGAATCGTATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGATGCTCAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGCCAAGCCTTTCAGTCAGAAGTCATTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATAACATTTTCTGGAAATCCTGGGCCTCCTTTGGAGTTATGTGATAGGGATCCCGGTATTCTTTCTGTAACTGTATGGAGTGGGTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAAATGCAACATATAATACTGATGAAGGTGTAAAGGCATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGGAATACTATTACCTTAGATCTACCACCTCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGACAGATTGGACAGTTGAGGTTTAGATCTCACAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATTTTGAAGGTTTTCAAACCTAGAGCTCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAACACCAATGGGTTGGCATTTTAGTTCGACCAGTAAAATACTCCCTCAAAGCTGCTGTCTTGCATATCGATACTGGTCCAGGGTTGGAGATTAAAGAGTCACATGTAATTGAGATGGAAAGCTATGCTGGTGTGTCACAGAATAAAGATGATCAGCTGCAGAATGACAGTGCTCAAATAAATTCTGATAAAAATTTTGAACGTTTAACTCTTAATGATGGTAAAATAGAATTTCCGAATTGGGCAAGTGACAATCCTTCTATTCTTTGGGTTCTGGTTCGTGCCATCAGTGACACCCTCAGCACAGGATCTTCTTCAGCCACAACAAGGAGAGAGAGTATTGTTGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTACATTTTACATATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGCACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGAGCGTATATGATGCTTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGAGCTAATTCAAGTTTCTTCCCGCTAATCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGACAAGACAAATGCAGAAGAAGCCAGGAAGAAACCAGAAAGCATATTATATATCAAATACGGAATTTCTGGTAATAGAACAATTGGGGCCCACCCTCCTGTCATGAATGAATCTACTGGAGTTGATGATGCCAGACAAGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGGCCTGTGCTTGATCCTTGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAAATGGCCTAAGAGTTGGACAACTAATTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTGGATGAGGAAGGAGTTTCTAAACCGGATGATGAGGTGCTATATGAGGTAAACGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGAGGATACGCATCTCTGTCCTCAAAACAAGGGGCAAGAATTATTATCTCTGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGCCCTCCCCTACTAGGGTTGCCAGATGTTGATGAGGCAAATATAAGCTGCAAGCCTGCTGGACCACATCTGGTTTGTGTTTTGCCACCGCCTCTCAGTTCTTCATTCTGCATTCCAGTTACTTCATGA 3471 0.4123 DLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYARLEVEFNTKKRERCCKYDIHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAALVNTRNKPLTQMVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAATRGYSFIISFSKSLSLHERILPFCMREVWVATACLSLIEATTSNYTDGHVAPDIEKEYFRLLGDLYSLSRLKFMRLAYLIGFGTDIERSPVNSASLSLLPWPKPAVWPSLPADASAEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRLRASLSAGNASEMFDNRQGPLDGSGFDASTRISPHKAPANSMSRTNSSPGNFDSSIDRPMRLAEIFIAAEHALKQTISNPELLKSLSSSEEFEHKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGNFDQAAESYEKVCALYAGEGWQDLLAEVLPNLAECQKMLNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVIRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEHQWVGILVRPVKYSLKAAVLHIDTGPGLEIKESHVIEMESYAGVSQNKDDQLQNDSAQINSDKNFERLTLNDGKIEFPNWASDNPSILWVLVRAISDTLSTGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLSVYDAWLDLQDGFVHTGQTEGRANSSFFPLIISPTSKAGILFSICLDKTNAEEARKKPESILYIKYGISGNRTIGAHPPVMNESTGVDDARQELIFRSAITLQRPVLDPCLAVGFLPLPSNGLRVGQLIKMQWRVERLKDLDEEGVSKPDDEVLYEVNANSGNWMIAGRKRGYASLSSKQGARIIISVLCMPLVAGYVRPPLLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIPVTS* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0881 1156 Coils Coil 87 107 - -
Pvu5g0881 1156 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1154 IPR045126 GO:0048193|GO:1990071
Pvu5g0881 1156 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1037 1115 IPR022233 -
Pvu5g0881 1156 PANTHER BNAC09G30770D PROTEIN 1 1154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0881 K20307 - gmx:100787264 2152.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0881 5 20806054 20820544 Pvu5g0881 5 20806054 20820544 ECH