Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0879 ATGACCTCTGTCCATAGCACCGTCGCTCCCCGTGCCTTCCTGCCTTCGATTTCCAAGCCCAAGCCGAGGGCTCCTCACACGAAATCCTTCGCCGGCGGCGTGGTGCACGACTTTCCGAGATTTTCTCGGAGCTGCATTTTCTCGGGAAACAATCGTGCGGTGGCGGCGAACGCGGCGGGGGAGGATTTAAACGTGATATCGGTGAAGAGCGACGATATTACGGACCAGCAGGAGGGCGTGTTGGTGAGTCGCGTCGAGATTGATGGCGTAGACAGCGAATTGGCGACTCGGATAAACGGATTCGGAGCGAAAGAAGGTTTGTTGTCGTTGGAAGGGTTTTCTTCTTCCTCTTCGACGTCTTCTTCAGCGTTGGTTGGGAGTGAGAGCGAGGAGGACGTGGAGAAGCTGATTGATAGGACTATCAACGCTACGATTGTGCTCGCCGCTGGTGCTTTCGCCATCACCAAACTTCTTACCATTGATAGTGATTACTGGCATGGATGGACGCTATATGAGATACTAAGATATGCACCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCTGTTCTTGCCAAGATGATGATTAGTGGGATTGTTTACTCCGTAGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTGTTTGAGTTTGACCGAGCGCGGATGTTCAGATCGGGAATTGTTGGTTTTACTCTTCATGGTTCTCTTTCTCATTACTATTACTATTTTTGCGAGGACCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGCCAAAGTTGCCTTTGATCAAACTGCTTGGTCAGCAATTTGGAACAGCATATATTATACAGTTGTTGCGTTACTACGTCTTGATCCTCCTATCAGTATTTTAAATGAATTGAAGGCTACGTTTTTTCCCATGTTGACGGCAGGTTGGAAGCTGTGGCCATTTGCACATCTCATAACTTATGGTGTGATACCAGTTGAGCAAAGACTTCTCTGGGTGGATACCGTAGAGCTTGTATGGGTGACCATACTTTCAACATTTTCAAATGAAAAATCAGAAGCAAAAAGCTCCGAGTCTATGATGCCTACAGAAGTGATATCCACCACATCTGTTCAACCTCCTGAGGAGTAA 1137 0.4749 MTSVHSTVAPRAFLPSISKPKPRAPHTKSFAGGVVHDFPRFSRSCIFSGNNRAVAANAAGEDLNVISVKSDDITDQQEGVLVSRVEIDGVDSELATRINGFGAKEGLLSLEGFSSSSSTSSSALVGSESEEDVEKLIDRTINATIVLAAGAFAITKLLTIDSDYWHGWTLYEILRYAPQHNWSAYEEALKTNPVLAKMMISGIVYSVGDWIAQCFEGKPLFEFDRARMFRSGIVGFTLHGSLSHYYYYFCEDLFPYKEWWVVPAKVAFDQTAWSAIWNSIYYTVVALLRLDPPISILNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDTVELVWVTILSTFSNEKSEAKSSESMMPTEVISTTSVQPPEE* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0879 378 MobiDBLite consensus disorder prediction 356 378 - -
Pvu5g0879 378 Pfam Mpv17 / PMP22 family 295 347 IPR007248 GO:0016021
Pvu5g0879 378 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 111 367 IPR007248 GO:0016021
Pvu5g0879 378 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 111 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0879 Pvu-Chr5 20660108 20663606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0879 185 353 Miscellaneous Gene Families AT2G14860 27.219 7.91e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0879 K13348 - gmx:100805057 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0879 5 20660108 20663606 Pvu5g0879 5 20660108 20663606 ECH