Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0864 ATGGCCGATCGGTTCTTTCCAAACGAGATGCCACGCTTTGTCGCAGAGACAACAGACCTAATTCCATTGACGGACTCTCTCACTGCCCTTCTCTCTCTTCCTTACCAAATCCTCTCTGAAAAGTTCCAAGCGTCTGCATTTCACTTGAAACAATCGGTACCCAAAAACTTCATTTTGAATTTGTGGGTGTCTTTCAATTGGCTTTCTTCGATTTTGGTTCAGGTGGTGAGGGAAACATGGGGATCACGCGGGAAGCGTGTGAAGGACTACACCCTTTACACGGGGGCTCTTGGAACAGCATACCTGCTTTTCAAGGCCTACCAAGTAACCAAGGATGGGAATGATCTTAACTTGTGCTCAGAGATTGTTGAGGCCTGTCACTCTGCTTCAGCAGATTCTGGACGTGTGACATTTCTCTGTGGGCGTGCTGGTGTTTGTGCTCTTGGTGCTGTTGTAGCTAAGCATACCGGTGATGATAGACTACTTGACTATTACCTGAGACAATTCAAAGAGATTGTAATACCTCGTGATTCGCCCTATGAGCTATTGTATGGCAGAACAGGTTACTTATGGGCTTGTTCATTCTTAAACAAGCATATTGGTCACAACACAATACCTACTACTCACATGAGGTCAGTAGTGGATGAAGTTATCTCCGCCGGCAGACAATTAGGTCACAAGGGAAGATGTCCTCTGATGTATGAATGGCATGGGAAGAAATACTGGGGTGCTGCACATGGACTTGCAGGAATTATGCATGTTTTGATGGACATGGAACTCAAGCCAGATGAGGTGGAAGAAGTCAAGGGTACCCTACGTTACATGATTAACTATCGTTTCCCTAGTGGCAATTATCCCTCCAGCGAAGGAAGTGAAAATGACCGTCTTGTGCATTGGTGTCATGGTGCTCCTGGAATCATTCTTACCCTTGTAAAGGCAGCTGAGGTTTTTGGGGAGAAGGAATTTTTGCAAGCAGCTGTAGATGCAGGGGAAGTAGTATGGAAGAGGGGTCTGCTTAAGCGAGTTGGGATCTGTCATGGCATCAGTGGGAACACCTATGTCTTTCTTTCTCTTTACAGATTGACGGGAAATGAGGAGTACCTGTACATGGCCAAAGCATTTGGTTGTTTCCTACTTGATAGGGCACAAAAACTGATCTCAGGAGGAAAGATGCATGGAGGAGATCGCCCCTATTCCTTATTTGAAGGTCTTGGAGGAATGGCATATACTTGTCTAGATATGGTTGATCCAAAAATGGCCAAGTTCCCAGGTTATGAATTTTGA 1284 0.454 MADRFFPNEMPRFVAETTDLIPLTDSLTALLSLPYQILSEKFQASAFHLKQSVPKNFILNLWVSFNWLSSILVQVVRETWGSRGKRVKDYTLYTGALGTAYLLFKAYQVTKDGNDLNLCSEIVEACHSASADSGRVTFLCGRAGVCALGAVVAKHTGDDRLLDYYLRQFKEIVIPRDSPYELLYGRTGYLWACSFLNKHIGHNTIPTTHMRSVVDEVISAGRQLGHKGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEEVKGTLRYMINYRFPSGNYPSSEGSENDRLVHWCHGAPGIILTLVKAAEVFGEKEFLQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNEEYLYMAKAFGCFLLDRAQKLISGGKMHGGDRPYSLFEGLGGMAYTCLDMVDPKMAKFPGYEF* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0864 427 CDD euk_LANCL 92 423 - -
Pvu5g0864 427 PRINTS LanC-like protein superfamily signature 89 107 IPR007822 -
Pvu5g0864 427 PRINTS LanC-like protein superfamily signature 180 195 IPR007822 -
Pvu5g0864 427 PRINTS LanC-like protein superfamily signature 241 257 IPR007822 -
Pvu5g0864 427 PRINTS LanC-like protein superfamily signature 296 316 IPR007822 -
Pvu5g0864 427 PRINTS LanC-like protein superfamily signature 342 355 IPR007822 -
Pvu5g0864 427 PRINTS LanC-like protein superfamily signature 397 414 IPR007822 -
Pvu5g0864 427 Pfam Lanthionine synthetase C-like protein 87 426 IPR007822 -
Pvu5g0864 427 SMART LANC_like_2 86 427 IPR007822 -
Pvu5g0864 427 SUPERFAMILY LanC-like 81 427 - -
Pvu5g0864 427 PANTHER LANC-LIKE PROTEIN GCL2 1 426 - -
Pvu5g0864 427 Gene3D - 1 427 IPR012341 GO:0005975
Pvu5g0864 427 PANTHER LANC-LIKE PROTEIN 1 426 - -
Pvu5g0864 427 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Pvu5g0864 427 PRINTS Eukaryotic LanC-like protein family signature 230 242 IPR020464 -
Pvu5g0864 427 PRINTS Eukaryotic LanC-like protein family signature 276 291 IPR020464 -
Pvu5g0864 427 PRINTS Eukaryotic LanC-like protein family signature 313 334 IPR020464 -
Pvu5g0864 427 PRINTS Eukaryotic LanC-like protein family signature 358 376 IPR020464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0864 Pvu-Chr5 20200230 20203365 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0864 - - gmx:100786158 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0864 5 20200230 20203365 Pvu5g0864 5 20200230 20203365 ECH