Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0858 ATGAATCGGTTGCTGAAAGCGGCGAGAGCCTCTGGTTCTCTCAACCTCTCCAATCGTTCCCTCACAGAAATACCTGACGAGGTTTACCGGAATCTGGAGGGGCTCGGCGGCGGCGGCGACGACGACAAGTGGTGGGAGGCTGTGGAGCTTCAGAAGCTTATTCTTGCTCACAATAGCATTGGATGGTTGAAGGAAGATCTGAAAAATTTGCCTTTTCTCGCTGTGCTGAATCTCAGCCACAACTGTCTCTCGCAGCTTCCCGCAGCTATAGGAGAGTTGCCTCAGTTGAAGATGTTGGATGTTTCGTTCAATTCGATAATTGAAATACCGGAGGAGATTGGATCGGCTGCATCGCTTGTTAAGCTTGATTGTTCAAATAATAGGCTCACGGAGCTTCCAAGCTCGCTTGGCAGATGCTTAGAATTGTTGGACTTAAAGGGATCAAACAATCTTCTTACAAGCTTGCCAGAAGATTTAGCAAATTGTTCTAAATTGTCTAAGCTAGATATGGAGGGAAACAAGCTAACAGTGATATCAGAAAATCTCATTTCATCATGGACCATGCTTACCGAATTCAATGCATCAAAAAATTTGCTGACTGGGTTACCAGTGAGCATTGGAGGCCTTTCACGTCTAATTCGTCTTGACCTTCATCAAAATAGAATATTGGCAATTCCTTCATCAATCAATGGTTGTCATTCACTTACAGAGCTTTATTTGGGGAATAACAATATTTCTACCGTACCAGTGGAGATAGCGGCCCTTAATCGACTTGGAACTTTAGTTCTTCACTCTAACCAGCTGAAGGACTATCCAGTAGAGGCATGCAATTTGAGTCTTTTAGTTTTAGATCTTTCTAATAATTCATTGAGTGGGTTACCCCCTGAAATGGGAAAGATGACTACATTGAGAAAACTTCTGCTTAGTGGAAATCCTTTGAGAACTCTTCGAAGCTCATTAGTATCTGGACCTACACCAGCGTTACTGAAATTTCTACGAAGCAGACTCTCTACAGATGAAGATTCTGAAACTGTAACCACATCAAAAGAAGAGGTGATCGCAATGGCTACACGATTGTCTATCACTTCAAAGGAACTTTCTATGGAAGGGTTGGGATTAACTGCTGTCCCATCAGAAGTGTGGGAATCAGGGGAGGTCATAAAACTTGATCTTTCAAGAAACTCCATCCAGGAGTTGCCCGTTCAACTTTCTTCTTGTGTTTCACTCCAGACATTGATTTTATCTAAGAATCAAATTATAGAGTGGCCAAGTTCAATTCTTAAATCACTTTCAAGCCTTTCATGTTTGAAGATAGACAACAATTCCCTCAGACAGATTCCTTCAGATGGCTTTGAAGTGGTGCCTAAGCTTCAGATCCTGGATTTAAGCGGTAATGCAGCTTCATTACTAGATGGTCCTGCATTTTCTAGCTTGCCTTACCTGCAAGAGCTTCACCTAAGAAGGATGAGGCTCAGTGAAGTTCCATCTGATATAGTGGGGCTGCATCAGCTACGGGTCCTTGACTTGAGTCAGAATTCCCTTCAATCAATTCCAGTGGGGTTAAAGAATCTCACTTCTCTCGAGGAGCTTGACTTATCTGATAACAACATCTCAGTTCTTCCACCTGAGCTGGGTTTGCTGGAACCAAGCCTACAGGCGTTGAGACTTGATGGGAATCCTCTCAGAAGCATTCGAAGGACTGTCTTGTCTAAAGGAACTAAAGCTGTTCTGAACTATTTGAAGGACAAATTGCCAGAGTAG 1761 0.4304 MNRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGGDDDKWWEAVELQKLILAHNSIGWLKEDLKNLPFLAVLNLSHNCLSQLPAAIGELPQLKMLDVSFNSIIEIPEEIGSAASLVKLDCSNNRLTELPSSLGRCLELLDLKGSNNLLTSLPEDLANCSKLSKLDMEGNKLTVISENLISSWTMLTEFNASKNLLTGLPVSIGGLSRLIRLDLHQNRILAIPSSINGCHSLTELYLGNNNISTVPVEIAALNRLGTLVLHSNQLKDYPVEACNLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSETVTTSKEEVIAMATRLSITSKELSMEGLGLTAVPSEVWESGEVIKLDLSRNSIQELPVQLSSCVSLQTLILSKNQIIEWPSSILKSLSSLSCLKIDNNSLRQIPSDGFEVVPKLQILDLSGNAASLLDGPAFSSLPYLQELHLRRMRLSEVPSDIVGLHQLRVLDLSQNSLQSIPVGLKNLTSLEELDLSDNNISVLPPELGLLEPSLQALRLDGNPLRSIRRTVLSKGTKAVLNYLKDKLPE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0858 586 ProSiteProfiles Leucine-rich repeat profile. 526 547 IPR001611 GO:0005515
Pvu5g0858 586 Gene3D Ribonuclease Inhibitor 277 335 IPR032675 -
Pvu5g0858 586 PRINTS Leucine-rich repeat signature 280 293 - -
Pvu5g0858 586 PRINTS Leucine-rich repeat signature 524 537 - -
Pvu5g0858 586 Gene3D Ribonuclease Inhibitor 126 276 IPR032675 -
Pvu5g0858 586 ProSiteProfiles Leucine-rich repeat profile. 279 300 IPR001611 GO:0005515
Pvu5g0858 586 SMART LRR_bac_2 189 205 - -
Pvu5g0858 586 SMART LRR_bac_2 70 89 - -
Pvu5g0858 586 SMART LRR_bac_2 501 520 - -
Pvu5g0858 586 SMART LRR_bac_2 139 158 - -
Pvu5g0858 586 SMART LRR_bac_2 93 112 - -
Pvu5g0858 586 SMART LRR_bac_2 383 402 - -
Pvu5g0858 586 SMART LRR_bac_2 116 135 - -
Pvu5g0858 586 SMART LRR_bac_2 430 449 - -
Pvu5g0858 586 SMART LRR_bac_2 524 544 - -
Pvu5g0858 586 SMART LRR_bac_2 232 251 - -
Pvu5g0858 586 SMART LRR_bac_2 162 181 - -
Pvu5g0858 586 Gene3D Ribonuclease Inhibitor 336 469 IPR032675 -
Pvu5g0858 586 PANTHER LRR RECEPTOR-LIKE KINASE 139 229 - -
Pvu5g0858 586 PANTHER LRR RECEPTOR-LIKE KINASE 14 135 - -
Pvu5g0858 586 PANTHER LRR RECEPTOR-LIKE KINASE 215 585 - -
Pvu5g0858 586 Pfam Leucine rich repeat 49 106 IPR001611 GO:0005515
Pvu5g0858 586 Pfam Leucine rich repeat 214 268 IPR001611 GO:0005515
Pvu5g0858 586 Pfam Leucine rich repeat 479 537 IPR001611 GO:0005515
Pvu5g0858 586 Gene3D Ribonuclease Inhibitor 3 125 IPR032675 -
Pvu5g0858 586 Gene3D Ribonuclease Inhibitor 470 583 IPR032675 -
Pvu5g0858 586 SUPERFAMILY L domain-like 364 564 - -
Pvu5g0858 586 ProSiteProfiles Leucine-rich repeat profile. 234 255 IPR001611 GO:0005515
Pvu5g0858 586 Pfam Leucine Rich Repeat 280 295 IPR001611 GO:0005515
Pvu5g0858 586 ProSiteProfiles Leucine-rich repeat profile. 503 525 IPR001611 GO:0005515
Pvu5g0858 586 SUPERFAMILY L domain-like 47 320 - -
Pvu5g0858 586 SMART LRR_typ_2 384 406 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 430 453 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 478 500 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 300 323 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 233 254 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 279 299 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 70 91 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 255 278 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 407 429 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 93 116 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 524 547 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 549 571 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 454 477 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 162 185 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 209 232 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 501 523 IPR003591 -
Pvu5g0858 586 SMART LRR_typ_2 117 139 IPR003591 -
Pvu5g0858 586 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 139 229 - -
Pvu5g0858 586 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 135 - -
Pvu5g0858 586 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 215 585 - -
Pvu5g0858 586 Pfam BspA type Leucine rich repeat region (6 copies) 137 198 IPR026906 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0858 52 544 Receptor kinase-like Gene Family AT4G08850 28.804 4.70e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0858 - - gmx:100781571 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0858 5 19994613 20003048 Pvu5g0858 5 19994613 20003048 ECH