Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0854 ATGGTAATTGATCATTACCAAGTTCCTGCTTGGGCAACAAAGGGATGGCTTAGAGTTTTGTCTAAAGAATTTCCAACTCTGGCATTCCATGCAAACATTAACAAGTCCTTTGGAAAAGGTTCTCTTCTATCTGTACTTAGACAATTTGCACATTTGAAACGGGATAAGCAAGCAATATCTGTTGGATTTTTTGGATATCCAAATGTTGGGAAGTCATCAGTAATCAACACTTTGCGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACGAAAGTCTGGCAGTATATAACACTTACAAAGAGAATCTTTTTGATTGATTGTCCAGGTGTAGTCTACCACAACAAGGATTCTGAAACAGATGTTGTGTTAAAGGGTGTGGTGCGTGTAACTAATTTGAAAGATGCTGCAGACCATATAGGTGAGGTTTTGAAACGTGTGAAGAAAACACATTTGGAGAGAGCATATAAAATAAAAGAGTGGGATGACGAAAATGACTTCTTACTGCAGCTTTGCAAATCAAGTGGCAAACTTCTGAAGGGTGGTGAACCTGACCTGATGACTGGAGCAAAGATGGTTCTTCATGACTGGCAGAGGGGTAGACTTCCGTTTTTTGTTCCTCCTCCTAAGCAGGAAGAAGAGTCTGAGGAACCTAATGTTAATGGGGTTGACATAGATGATGCAGTTGATGGCAATGAAGCATCTGCTGCTATTAAGGCTATCGCAGATGTTCTTTCGTCTCAGCAGCAAATAAGTGTCCCTGTTCAAAAAGATTTGTATAGTGAGAATGAGTTGAAGGGGGAGGCGACTGACCAAGCTCCTAACCACAATGCAGAAGATATTCCAGCTTCTGATAGTGACACATCTGAACAGGATTCACCTACTAAGATTCCATCTGAGCCGCTTCTTTGCTGA 921 0.4126 MVIDHYQVPAWATKGWLRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFAHLKRDKQAISVGFFGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNKDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKTHLERAYKIKEWDDENDFLLQLCKSSGKLLKGGEPDLMTGAKMVLHDWQRGRLPFFVPPPKQEEESEEPNVNGVDIDDAVDGNEASAAIKAIADVLSSQQQISVPVQKDLYSENELKGEATDQAPNHNAEDIPASDSDTSEQDSPTKIPSEPLLC* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0854 306 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 8 294 IPR024929 GO:0005730
Pvu5g0854 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 187 IPR027417 -
Pvu5g0854 306 MobiDBLite consensus disorder prediction 279 298 - -
Pvu5g0854 306 Gene3D - 3 115 IPR027417 -
Pvu5g0854 306 MobiDBLite consensus disorder prediction 264 306 - -
Pvu5g0854 306 Pfam 50S ribosome-binding GTPase 61 163 IPR006073 GO:0005525
Pvu5g0854 306 Gene3D - 116 208 IPR023179 -
Pvu5g0854 306 PRINTS GTP1/OBG GTP-binding protein family signature 61 81 IPR006073 GO:0005525
Pvu5g0854 306 PRINTS GTP1/OBG GTP-binding protein family signature 107 122 IPR006073 GO:0005525
Pvu5g0854 306 PANTHER GTP-BINDING PROTEIN-RELATED 8 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0854 Pvu-Chr5 19884186 19888997 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0854 K14537 - gmx:100781028 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0854 5 19884186 19888997 Pvu11g1791 11 44437108 44439790 PCT