Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0851 ATGATAGGAGAAGTTCAAGCACTTATTATTTTTCCAATTATACCTTATGGTATCCTTGCTGTCTTCTATATCTTCTGGATTTCTGCTGCTCTTCATTTGTTCAGCTCTGGTCAGGTTGTTCAGAACAACTGCAATTCTAACTGCTGCACGTATTACCTCATTGAGAAAAAGGTGATATGTGATCGGTGTTGTGGATATAGCATTCATTACACACCACATATTGGAGCTGCCATCCTTTTTCATCTATTTGGCTGTTATTGGGCTACACAGTTTTTCATAGCTTGCTTGTCAACAGTGATTGCTGGATCTGTTGCCTCTTATTATTGGGCCCATGGTGAAGCATCTCCTGAAATTCCTTTTATTTCAGTATTGTCCTCCATGAAGAGGCTTATGTTTTACAGTCTTGGTTCTGTGGCTCTTGGTTCTCTGACTGTATCATTTGTAGAGTCAATCCGCTTTCTGCTCGAATCTATTCGCCGGAAACTAAAAGTCTCCAGTCATGTACCTGATAGCTGGATTGGCAAGGCTGCTTACCAATCTTCTCAATGCTTTCAAAGATGTATTGGGTGGACCATCAAATCAGTGAACCGAAATGCTTACATCATGATTGCTGTAACGGGTAAAAGTTTCTTTAACGCCTCTGCTGTTGCAACCGAATTGATCATGAATAACATCCTACGGATTGGACGTGTCAATGTGATTGGAGATGTTATTTTGTTCCTTGGAAAATTGTGTGTCAGTCTCTCTAGTGCTGTTTTTGCTTTCCTCATGCTGGACACGCACAAGTACAGATCAGCGCATGACAAGATATCATCTCCACTTTTGCCTGTTGTGGTTTGCTGGGCTCTTGGATATGTTGTTGCAACTCTTTTCTTTGCAGTTGTAGAGATGTCAATAGACACCATCATTCTCTCATTTTGCCAAGATTCTGAAGAGCATGGAACAGCACAGTATGCTTCACCTCTTCTCATTGAAACCCTGGGAGACCAAAATGAGATGCAGAGACTTGCACAAGCACCGCAATGA 1026 0.4152 MIGEVQALIIFPIIPYGILAVFYIFWISAALHLFSSGQVVQNNCNSNCCTYYLIEKKVICDRCCGYSIHYTPHIGAAILFHLFGCYWATQFFIACLSTVIAGSVASYYWAHGEASPEIPFISVLSSMKRLMFYSLGSVALGSLTVSFVESIRFLLESIRRKLKVSSHVPDSWIGKAAYQSSQCFQRCIGWTIKSVNRNAYIMIAVTGKSFFNASAVATELIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYRSAHDKISSPLLPVVVCWALGYVVATLFFAVVEMSIDTIILSFCQDSEEHGTAQYASPLLIETLGDQNEMQRLAQAPQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0851 341 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 1 338 - -
Pvu5g0851 341 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 1 338 IPR007603 GO:0022857|GO:0055085
Pvu5g0851 341 Pfam Plasma-membrane choline transporter 2 311 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0851 Pvu-Chr5 19794878 19797841 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0851 K15377 - gmx:100779959 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0851 5 19794878 19797841 Pvu5g0851 5 19794878 19797841 ECH