Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0837 ATGAACAATCACATTCTCTTCCTGTTCCTTCTCATTGCATTTGCCCCCACTTTCTCCCACCGCTTTCAACCTCACGCTGCTCCTGCAGGGCCCTTGATTAAGCATCTGTCTTCGATCATCAAATGGACAAGGTCTACCTCCAAGACGCCACTCTCAGATGGGAATGTTCTTCAATTTGAAAATGGTTACGTGGTTGAGACTGTTGTGGAAGGGAACGAGATTGGGGTCATCCCTCATGGGATCCGTGTCTCTGAGGAGGATGGGGAACTCTTTGCTGTTGATGCAATTAATAGCAACATTGTTCGGATAACTCCGCCGTTGTCACAATATAGTAGAGGAAGATTGGTGGCAGGGTCATTTCAGGGATACACTGGTCATGTGGATGGAAAACCAAGTGATGCTCGTTTCAATCATCCCAAAGGCATAACCGTGGATGATAAGGGGAATGTTTATGTTGCTGATACTCAGAATCTTGCTATCAGAAAGATTGGAGATTCTGGTGTGACGACCATTGCTGGAGGAAAATCAAATGTCGCTGGGTACAGAGATGGGCCTAGTGAGGATGCTAAGTTCTCGAATGATTTTGATGTGGTATATGTTCGACCCACCTGTTCCTTGTTGGTCATTGATAGAGGAAATGCTGCTCTTCGGCAAATCTCTCTTGACCAGGAGGACTGTGATTATCAGTCTAATTCAATTTCCAGTACAGATATCCTTACAGTTGTTGGTGCCGTTATAGTAGGATATGCTACATGTATGCTTCAGCAGGGATTTGGATCCTCTTTCTTCTCAAAATCAAGACCATCAGAAAGAGGGTTCAAAGGGCCAGCAAGCAATGAGAAACACATGCCAATCCTGGAGAGCAGTAAAGAGGAGCCGGGATGGCCGTCTTTTGGACAGCTCATTGTTGATCTTTCTAAACTTTCCCTTGAAGCATTAGCTGGAGCATTCACTCAATTCATACCTTCACATTTCAGACCTGGCATCTCCAAGAGAGGCTTAACACCGCTGAAAGATCGTCTTGTAATGCCTGAAGATGAAGCCCAGCCTCCATTGATCAACAGACAAAATGCTCAAGGGCATGCTCCTCTAACCAAAAATCAGCTGCCATCACAGCTCCATACTCCTCTTAGTGATAGTCGGATGGCATCACATGTCCATACTCTTACCGATAATCGACTGGCGCCACATGTCCATACTCCAAGCACAGCTGAGAAATATTCAGAAATGAAGCCCCCCAGGATAAAATCAAGCAGTTTCAAGGACCCTTCTTTGTCAAGCAAGCACCGATCATCAAAACGACCCGATTATGCTGAATTCTATGGATCCACTGAGATTCCTCCATACACCAAAACTAAGAGCCAGAAAGAAAGGCCAAGACATAGGCAACGAGAAAAGAGTGGAGAATTTGTTATGGGGGCGGTGGGAGCTGAGGCTAAACCTGTTGAAACAAGGGCTGTTGATCGTAATAATTCAAAGTTTGACCATTACAGTATGAGGTCTAAGTATGCTTCTGAGGAGACCTTCCGATTCAACTCTAAGTAA 1545 0.4511 MNNHILFLFLLIAFAPTFSHRFQPHAAPAGPLIKHLSSIIKWTRSTSKTPLSDGNVLQFENGYVVETVVEGNEIGVIPHGIRVSEEDGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITVDDKGNVYVADTQNLAIRKIGDSGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLDQEDCDYQSNSISSTDILTVVGAVIVGYATCMLQQGFGSSFFSKSRPSERGFKGPASNEKHMPILESSKEEPGWPSFGQLIVDLSKLSLEALAGAFTQFIPSHFRPGISKRGLTPLKDRLVMPEDEAQPPLINRQNAQGHAPLTKNQLPSQLHTPLSDSRMASHVHTLTDNRLAPHVHTPSTAEKYSEMKPPRIKSSSFKDPSLSSKHRSSKRPDYAEFYGSTEIPPYTKTKSQKERPRHRQREKSGEFVMGAVGAEAKPVETRAVDRNNSKFDHYSMRSKYASEETFRFNSK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0837 514 MobiDBLite consensus disorder prediction 362 387 - -
Pvu5g0837 514 PANTHER NHL DOMAIN-CONTAINING PROTEIN 16 511 - -
Pvu5g0837 514 Gene3D - 41 221 IPR011042 -
Pvu5g0837 514 Pfam NHL repeat 136 162 IPR001258 GO:0005515
Pvu5g0837 514 MobiDBLite consensus disorder prediction 362 491 - -
Pvu5g0837 514 PANTHER - 16 511 - -
Pvu5g0837 514 SUPERFAMILY NHL repeat 56 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0837 Pvu-Chr5 18864633 18869461 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0837 - - vra:106778116 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0837 5 18864633 18869461 Pvu5g0837 5 18864633 18869461 ECH