Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0759 ATGGCCGGAAGCAGCAGTTCCGATGGCAGAGCAACGGCAGCTCTGTTGGAAGAATCTGATGACAAGGGAAGAGAAAACAGAAGATGGTTCAACAAAGTGTTGGACATGGAAGAGGCCAAGCACCAACTCTTGTTTTCGCTTCCAATGATTCTTACCAACTTGTTCTATTACTTAATCACTTTGGTTTCTGTGATGCTAGTAGGTCACCTTGGAGAGCTTCAGCTTGCTGGTGCTACTCTTGCAAACTCATGGTTCAGTGTCACTGGTGTGGCTCTCATGGTTGGTTTGAGTGGGGCACTGGAAACATTGTGTGGGCAAGCATTTGGTGCAAAGGAATACTATAAGCTGGGAAGTTACCTACAAGCCTCGTGCATCATATCTTTTATTTTTTCCATCATTTTATCCATTATTTGGTTCTATACAGAACCCATCCTAGTGCTGCTTCACCAATCTCATAACATTGCAAGAACGGCTGCTCTTTATATGAGGTTTCTTATGCCGGGATTGTTTGCATATAGCTTCTTGCAGAACATGTTGAGGTTTCTTCAGACACAATCTGTAGTAATGCCATTGGTTGTACTCTCAGCTCTTCCTTTGGTTGTTCATATTAGCCTTGCGTATGGTTTGGTTCAGGTGTCAGGTCTGAGTTTTACGGGTGCACCAGTTGCAGTTTCTATTTCACTGTGGATATCAATGCTGTTACTAGCCTTGTATGTAATGTATGCTAAGAAGTTCAAGCAGACATGGCAAGGATTTTCAATGCATTCATTCCATTACGTACTTACATACATGAAACTAGCTCTGCCCTCCGCTGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAGTTATGGTTTTCTTAGCTGGACTTTATCCTGACTCGCAGAAAACTACTTCTTTGATTGCAATTTGTGCAAATACGGAACTCATTGCCTACATGATCACTTATGGTCTCAGTGCAGCTGCAAGCACAAGGGTATCCAATGAACTAGGAGCAGGCAACCCGGAACGAGCTAAACATGCAATGAATGTCACTCTCAAGCTCTCTCTCCTCCTTGGGTTCTGTTTTGTTTTGGCACTTGGATTTGGTCATAATATCTGGATTCAGTTTTTCAGTGATAGTTCTATAATCAAAGAGGAGTTTGCATCAGTGACACCTTTGCTTTCCCTTTCCATATTACTAGATGCCATCCAAGGTGTCTTGTCAGGGGTGACCAGAGGATGTGGCTGGCAGCACTTGGCCGTTTACATTAACCTTGCAAGTTTTTATCTTATTGGTCTGCCAATTTCATGTCTCCTAGGCTTTAAGACCAATTTGCAGTATAAGGGTTTATGGATTGGTTTGATTTGTGGACTGCTTTGTCAGAGTGTGACTCTCTTCCTTTTCACAAGGCGTGCCAAATGGTCTAAATTGGATCTTTCCCGCGAAGACAAAGAGAAAAACCATCCTCTTCTTATTTAA 1461 0.4257 MAGSSSSDGRATAALLEESDDKGRENRRWFNKVLDMEEAKHQLLFSLPMILTNLFYYLITLVSVMLVGHLGELQLAGATLANSWFSVTGVALMVGLSGALETLCGQAFGAKEYYKLGSYLQASCIISFIFSIILSIIWFYTEPILVLLHQSHNIARTAALYMRFLMPGLFAYSFLQNMLRFLQTQSVVMPLVVLSALPLVVHISLAYGLVQVSGLSFTGAPVAVSISLWISMLLLALYVMYAKKFKQTWQGFSMHSFHYVLTYMKLALPSAAMVCLEYWAFEVMVFLAGLYPDSQKTTSLIAICANTELIAYMITYGLSAAASTRVSNELGAGNPERAKHAMNVTLKLSLLLGFCFVLALGFGHNIWIQFFSDSSIIKEEFASVTPLLSLSILLDAIQGVLSGVTRGCGWQHLAVYINLASFYLIGLPISCLLGFKTNLQYKGLWIGLICGLLCQSVTLFLFTRRAKWSKLDLSREDKEKNHPLLI* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0759 486 TIGRFAM matE: MATE efflux family protein 48 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g0759 486 Pfam MatE 48 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g0759 486 Pfam MatE 269 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu5g0759 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 478 - -
Pvu5g0759 486 CDD MATE_eukaryotic 38 470 IPR045069 GO:0042910|GO:1990961
Pvu5g0759 486 PANTHER PROTEIN DETOXIFICATION 20 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0759 Pvu-Chr5 12762031 12769193 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0759 K03327 - gmx:100816310 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0759 5 12762031 12769193 Pvu5g0759 5 12762031 12769193 ECH