Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0733 ATGGAGGAGCATTCGCTGAATATTCCCAAAACCTTCGTTTACGACACTCTCTGCCCCCTCGCTCTATCCGCTGCCGATTCCCCATTCCCTGACCACCATGAACCCTACTCCGTTTACCGCAACGAGATTTCAGTCGACACTCCCCAATGCGCCTTGCCCACCTCCACCACCGTCGATTTCTTCTCCCTCGACGTTGCTTCGGAGGCCTACGGCCACGAATCCCTCCCTGAGCCGCTCGCCGCAACGCCCGAACCGAAGACGCCGACTCCTGCGCCCGAGCCGAAGCTCGAGAGTGTCTGGTTCGGCGGGAATTGCAAATTTAAGAGTCCTATGCTTCAGCTGCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCACCAACAGCTGCAGAGAAAGCTGTACGGGATATGGCAATAGAATCCGTGTTTGGAGTTATAAAACATATATGGCCTCATTGCCAGGTGGAAGTGTTTGGGTCTTTCAGGACAGGGCTGTATCTTCCCACCAGTGACATTGACGTTGTGATTCTGAAATCAGGCTTGCCAAATCCACAGATTGGACTGAATGCAATTTCTAAAGCCTTGTCGCAGAGGAGCATGGCTAAAAGGATTCAGGTCATTGGAAAGGCTCGAGTACCAATTATTAAATTTGTTGAGAAGATAAGTGGTCTTGCATTTGATATAAGTTTTGACATTGACAATGGACCTAAAGCGGCTGAGTATATTCAGGAAGCAGTGCTCAAGTGGCCACCTCTAAGGCCCTTGTGTTTGATTTTGAAAGTATTTTTGCAGCAAAGAGAACTAAATGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTTCTTGCCATGCTGATGGCAATGTTGCGGAATCTTCGCCTGAGCCAAGCTTCTGCAGAGCACAACCTGGGAGTACTTTTGGTGCATTTTTTTGATTTCTATGGACGCAAATTGAACTCATCAGATGTTGGTGTGTCTTGTAATGGGACAGGCACCTTTTTTGTGAAGAGTAGTAAAGGGTTTTTAAACAAAGGACGACCAAGTCTTATTTCCATTGAGGATCCACAGGCACCAGAAAATGACATCGGGAAGAACTCCTTTAATTATTTCCAGATTAGGTCAGCTTTTTCAATGGCCTTCAAAAATTTGACAAATCCCAAGATCATCATGAGCTTAGGACCGAACAGGAGCATTCTGGGGACTATAATTAGACCAGATCCTGTTTTACTGGAGCGAAAAGGGGGCTTGAACGGCGATGTGACTTTTGATAAGTTGCTTCCTGGTGCTGGCGAGCCATTACAACAACAGTATGGAGAACAGGATATGTTATGCAATTGGCAGTTAGATTATGAAGAAGAACCACTACCTCGGGGAGTCGATGCCAGTGCAGAGCCTAGCTCACGTTCTTCAACAAAGAAGAGGAAATCTGGTTTGAAGAATTCCAGTAAGAAGCTAAAGGAAAATGAGAATATTGAGATGAAAGGGAATGAGGAGAATGACTCTAGAAAAGGAAAGGATAAAAAGAACAGAAAAAAGAAAAAAACTCAACTAGGAGACAGCGGTTATTAG 1569 0.4532 MEEHSLNIPKTFVYDTLCPLALSAADSPFPDHHEPYSVYRNEISVDTPQCALPTSTTVDFFSLDVASEAYGHESLPEPLAATPEPKTPTPAPEPKLESVWFGGNCKFKSPMLQLHKEIVDFCEFLSPTAAEKAVRDMAIESVFGVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKSGLPNPQIGLNAISKALSQRSMAKRIQVIGKARVPIIKFVEKISGLAFDISFDIDNGPKAAEYIQEAVLKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMAMLRNLRLSQASAEHNLGVLLVHFFDFYGRKLNSSDVGVSCNGTGTFFVKSSKGFLNKGRPSLISIEDPQAPENDIGKNSFNYFQIRSAFSMAFKNLTNPKIIMSLGPNRSILGTIIRPDPVLLERKGGLNGDVTFDKLLPGAGEPLQQQYGEQDMLCNWQLDYEEEPLPRGVDASAEPSSRSSTKKRKSGLKNSSKKLKENENIEMKGNEENDSRKGKDKKNRKKKKTQLGDSGY* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0733 522 Pfam Cid1 family poly A polymerase 302 360 IPR002058 -
Pvu5g0733 522 MobiDBLite consensus disorder prediction 74 94 - -
Pvu5g0733 522 SUPERFAMILY Nucleotidyltransferase 111 262 IPR043519 -
Pvu5g0733 522 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 100 516 - -
Pvu5g0733 522 Gene3D - 109 385 - -
Pvu5g0733 522 MobiDBLite consensus disorder prediction 481 505 - -
Pvu5g0733 522 CDD NT_PAP_TUTase 134 244 - -
Pvu5g0733 522 Gene3D Beta Polymerase, domain 2 127 235 IPR043519 -
Pvu5g0733 522 PANTHER POLY(A) RNA POLYMERASE 100 516 IPR045862 GO:0004652|GO:0031499|GO:0043631
Pvu5g0733 522 MobiDBLite consensus disorder prediction 456 522 - -
Pvu5g0733 522 SUPERFAMILY PAP/OAS1 substrate-binding domain 250 390 - -
Pvu5g0733 522 Pfam Nucleotidyltransferase domain 146 243 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0733 Pvu-Chr5 11716829 11724344 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0733 K03514 - gmx:100811320 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0733 5 11716829 11724344 Pvu5g0733 5 11716829 11724344 ECH