Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0714 ATGGAAACGAGGATGAAGAAGTACAACCGGCAAGTGAGTCCGGAGAGGGCCAAAGTGTGGACTGAGAAGTCCCCAAAATACCACCAGAGTCTGAAGGTACCCGTGATTTATTATCTTTGTCGAAACAGGCAGCTAGAGCACCCTCATTTCATGGAGGTCCCACTTTCTTCACCGGATGGGCTATACTTGAGAGATGTGATTGATAGACTAAATGTCTTGAGAGGAAGAGGAATGGCTTCCTTATACTCATGGTCTTGCAAGAGGAGCTACAAACATGGATTTGTTTGGCATGATCTATGTGAAGATGATATAATTCTTCCAGCTCATGGAAATGAATATGTTCTCAAGGGTTCTGAGCTCTTTGATGAATCAAATTCAGATCGTTTCAGTCCCGTCAACAATGTTCAAATACAAAGCGTGAAGATGTTGCCGGGACCAGCTTCTTCTAGGAGCCATGATGAAGCCTCATCCTCTTCTAGCATGAACGGGAAAGATACAAGAATCTCCCAAGATGATGAGCTTTCCCAAGAACAACAATCTGGTTCCTCTGATGTTTCTCCAGAGGCTAGGGTCGAAAAGGGTGATATTCTAGGCCTGGCATTGACAGAATACAAAATTTATAAAACTGATGGACTGGCTGATGCTTCAACTCAGACTGAAGAAAATATCAGCAGATCCAGAAGTCAGAAAACTTGTACTAGGGGTGTATCAACGGAGGATGGATCATTGGAATATGAATGTCATGAAATATGTCAAGTTGAAGATCCACAAGTGAAAGATACTCCACAAATCTGTAGGGATACTGTTTCTCCTCCATCAACTTCAAGTTCCTCGTCTTTTGTGGGGAAGGCTGAAACTTTGGAATCTCTGATTAGAGCTGATGCTAGTAAAGTAAACAGCTTTAGGATTCTTGAAGAGGAGAGCATGCGGGAGCCAACCAACACGAGGCTGAAGGCTTCAAATTTGCTGATGCAACTGATCTCATGTGGCTCAATATCAGTGAAAAATCACAGTTTTGGACTTATTCCTTCCTATAAGCCCAGGTTTTCCAGCTCAAAATTTCCTTCCCCACTGTTCTCAACTTCTTTCGTGTTGGGGGAGTTAGATTGCTTATCTGAGAATCCAACGTTGATGAGCCTCAGATTGGAAGACAAAGAATATTTTAGTGGAAGCTTAGTTGAGACTAAACTGAAGGAAGGAAATGGACTCAATGTTTTGAAACGCTCTTCTTCCTACAGTGATGAGAGGACATTTAAAGAACAGAAACCACAAGAAGACAAAGAGGAATCATCATCCTCAGGACATTCAAAATGCATTCCACGATCAATTAAGGCTTCATTGTCCAAGCATCCCCGAAGTGAATCCATGAGATCCCCTGTTTCTGATGGACCACGCCATTCATCAGATAGAATTGATGGCTCTGGCATATCCTCAGTGACATCTAATGGCAGCAGCAAAAGAATCACAGAACCTTTGTCAGGGAAAAAACAATCAAAGAGGATAGATTCATTTAAAGAAGAGGAGGAAGTGATCAAAATTGAAGAAAGCTTGCTTCAGGAGCTCGGGTTATAA 1572 0.4224 METRMKKYNRQVSPERAKVWTEKSPKYHQSLKVPVIYYLCRNRQLEHPHFMEVPLSSPDGLYLRDVIDRLNVLRGRGMASLYSWSCKRSYKHGFVWHDLCEDDIILPAHGNEYVLKGSELFDESNSDRFSPVNNVQIQSVKMLPGPASSRSHDEASSSSSMNGKDTRISQDDELSQEQQSGSSDVSPEARVEKGDILGLALTEYKIYKTDGLADASTQTEENISRSRSQKTCTRGVSTEDGSLEYECHEICQVEDPQVKDTPQICRDTVSPPSTSSSSSFVGKAETLESLIRADASKVNSFRILEEESMREPTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKPRFSSSKFPSPLFSTSFVLGELDCLSENPTLMSLRLEDKEYFSGSLVETKLKEGNGLNVLKRSSSYSDERTFKEQKPQEDKEESSSSGHSKCIPRSIKASLSKHPRSESMRSPVSDGPRHSSDRIDGSGISSVTSNGSSKRITEPLSGKKQSKRIDSFKEEEEVIKIEESLLQELGL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0714 523 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 5 493 - -
Pvu5g0714 523 MobiDBLite consensus disorder prediction 471 491 - -
Pvu5g0714 523 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 5 493 IPR010369 -
Pvu5g0714 523 MobiDBLite consensus disorder prediction 412 434 - -
Pvu5g0714 523 MobiDBLite consensus disorder prediction 492 506 - -
Pvu5g0714 523 MobiDBLite consensus disorder prediction 408 506 - -
Pvu5g0714 523 Pfam Protein SOSEKI, plant 33 417 IPR010369 -
Pvu5g0714 523 MobiDBLite consensus disorder prediction 143 165 - -
Pvu5g0714 523 MobiDBLite consensus disorder prediction 143 191 - -
Pvu5g0714 523 PIRSF UCP031043 1 462 IPR021182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0714 Pvu-Chr5 11116288 11120988 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0714 - - gmx:100783687 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1541 11 38664695 38665422 Pvu5g0714 5 11116288 11120988 PCT