Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0711 ATGCAAAGTGTCTCTAGTTTGTTATCAATGGAAACTGATCTGTTAGACACAGAACCCGGGACCATTAATGGAGGTTCCATAGTGAAGAAATCAAATCAGCGTAAGAGGAAGAATTTCATTGTGGATGAGGAAGGGCAAATGGGGTCGCGAGAGAAGCTGGCAAAGAGAATCTTATTATCTCTTACGAGGCCTTCCTATGTCATGGGATTGGGTCCCAAACCTCTGAGGAAGGAACACCGTACAAGGTTGCGCTACCTGCTGCGGAGGCTCATCAACCAGCATCACTGGGTTGCAGCCAGTGGTGTTCTCAGTGCCTACATGAAGGGCACACTTAATGACTCCTCTCCCTTCAGAAATCGTCTTAAGTTTTGGGTTTTAATGGAGCTTCTTAAGCATGTGAAAAGTAATTCTATTAATCCCACAAGAATTGAGAATCTCTATGATATTTGGTGGAAGAAAATTGGATCAATGAAGAGTTGGCCTTTACAGAGCAGATATGCAGTCCATTTGGAGTTCATTTTTTTCTGTCTTATGCAAGGGAAGGCGGGGGATGCATACCAGCTTGTTTTATGCATTGAGCAAGAAAGGGTTGACATTCATCCTGTGTTAAAGATGATGATGGGTTTGACATTCTATGAGCTGTGGTATTCTTCTATCCCCAAAGAATTCCAGTGGAGAAACTCAGACCAGTTTGACTTGCAAGAGAACTCACATATGGAGGAGACCTCATTTACCAATAAAACTGGACTATCTGAGCAGTATAAGTCAGTTGAATCCCATATGGCTGACTCGTGTTGTCAACGTGATTCAGATGCCTCTATCATGAATAATAAGCATATATCTAGGGATGTTGTATTGAATGAAGACATGGAGGTTGGTACTAATAAAAGAGAAAATCAACATCAGAACTTTCAGCCAGAAGGTTTTTACTTAAATTCTGAAGAGCAAAAAGGATGTAGAGACCCTTTTTCTAACAGTGGAGGTCTTACACAGGATATCTTGTATGGTCTTGGGGGACTTGATTTGTGGTTGTTGCCCTTGCATTTTTCTGATGAGAGAAATTTCGAGGAGTTCATGTATGTGCAGAGAAATCAGCCTAATGCCTATTATGAAAATTCAGTGAAATACTTACAACTAGCTCTCAACTCAGAACCTTCTGCTTCAGCAGCACTACTTCCATTGGTACAGCTGTTGCTAATTGGAGGACAAGTTGACAAGGCTCTAAATATGCTTGAGAAGCAGTGCTGTAATACATCCTCTGTACTCCCACTAAGAGTGAGGGCAGCTCTCTTGGAGCGTTTTGATCGAAACAACTCTGTCATGCTTTTTAGCTGTTTTGAGAATATATTAAAGAAGGATCCAACATGTAGTGATGCCTTAGCTAAACTTATCAAGATGCACCAAAATGGAGAGTACAGTCTTGAGTCTCTGCTTGAAATGATTGCTTTACATTTAGATGTTACAGATTCAGAACACAATACGTGGAAGGTTTTCTCTTCATGTTTCTTAAGACTGTTTTCCTACGAAGAAGACTGTATGTCTTCATGCCCCATTCAAACTAAATATAGACACAAACAACATCGTTCCTTTAACAAACCCCCTAAAATATTTACGGATGGTACATCTGGAAAATCTTGGTATCTTCGTTGTAGGTGGTGGATAACAAGACATTTCAGCAATAGCAAGCTTGAATCAGAGATTGAATCAGGTGATTTGCAGTTACTGACATGCAAAGCAGCATGTGCATCGTATATGTATGGACGCGAGTTCAGCTATGTTGAGAAGGCTTTTTCTCATTTAGAGAAAGAAAATGATAAGGAGTTGTTGTTGTTCTTGGATGAGCACAGGGGAAATTCTTTAGGAATTTATAAAAAAATTCGTAAGAAATTACACATATAA 1899 0.3997 MQSVSSLLSMETDLLDTEPGTINGGSIVKKSNQRKRKNFIVDEEGQMGSREKLAKRILLSLTRPSYVMGLGPKPLRKEHRTRLRYLLRRLINQHHWVAASGVLSAYMKGTLNDSSPFRNRLKFWVLMELLKHVKSNSINPTRIENLYDIWWKKIGSMKSWPLQSRYAVHLEFIFFCLMQGKAGDAYQLVLCIEQERVDIHPVLKMMMGLTFYELWYSSIPKEFQWRNSDQFDLQENSHMEETSFTNKTGLSEQYKSVESHMADSCCQRDSDASIMNNKHISRDVVLNEDMEVGTNKRENQHQNFQPEGFYLNSEEQKGCRDPFSNSGGLTQDILYGLGGLDLWLLPLHFSDERNFEEFMYVQRNQPNAYYENSVKYLQLALNSEPSASAALLPLVQLLLIGGQVDKALNMLEKQCCNTSSVLPLRVRAALLERFDRNNSVMLFSCFENILKKDPTCSDALAKLIKMHQNGEYSLESLLEMIALHLDVTDSEHNTWKVFSSCFLRLFSYEEDCMSSCPIQTKYRHKQHRSFNKPPKIFTDGTSGKSWYLRCRWWITRHFSNSKLESEIESGDLQLLTCKAACASYMYGREFSYVEKAFSHLEKENDKELLLFLDEHRGNSLGIYKKIRKKLHI* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0711 632 Pfam TAF RNA Polymerase I subunit A 90 596 IPR039495 GO:0000120|GO:0006360
Pvu5g0711 632 PANTHER TAF RNA POLYMERASE I SUBUNIT A 29 629 - -
Pvu5g0711 632 Coils Coil 623 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0711 Pvu-Chr5 10984065 10997434 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0711 - - var:108333857 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0711 5 10984065 10997434 Pvu5g0711 5 10984065 10997434 ECH