Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0681 ATGGCTTCTATGCCTCAATCCAAAACTTCCCTTCCTACCTTCTTCTTCTTCTTCTTCTCCTCCTTCACCATAATTCACGCTATTGTTCCTCAAAATGAGACCTTCAAATTCGAAAACTCAGGTGAATTTGGACCCTACATTACCGAGTATGATGCTAGTTACCGGATGCAAGACATTTTCAGCTCTCCTTTCCAAGTTGCATTCTACAACACCACCCCAAATGCCTTCACTCTAGCTTTGCGCATGGGACTTAGACGCTCAGAGCAACTTTTTCGTTGGGTATGGGAGGCCAATAGAGGCAACCCAGTTGGAGAGAATGCCACTTTTTCGCTTGGCACTGATGGCAACCTTGTGTTGGCTGAAGCTGATGGTAGAATCGCTTGGCAAACCAACACTGCCAACAAGGGTGTTGTGGCCTTCAAGTTACTTCCAAATGGGAACATGGTCCTCCTTGATGCACAAGGAAAGTTTGTTTGGCAAAGTTTTGACTATCCCACAGATACCCTTTTGATTGATCAATATCTTAGAGCAAAAGGGCCATCCAAGTTGGTTAGTAGGCTTTCAGAGAGGGATAATGTAGATGGTCCTTATAGTTTGGTTTTGGAGCCTAAAAGATTGGCCTTGTACTACAAGAGCAAGAATTCTCCTAGACCAAATCCTTATTGGTATAGGATCTTCACTCAACAAGGTTCAGTGGAAAATATCACCCTCACTTCTTATCCAGACACTTTTGAAGTTGAATTCACCTATGCGCTTAGTTCTTCCACCAGTGACTACAGAACCATGGCGGAACCATTGAACAACATTCCCGTTGGAGTCTTGGGAATGCCAGTGAACAACAGCACCTTGTCATACCTTAGGCTTGGAATTGATGGCAATATTAGGCTGCACACTTACTTCCTCAATGTGCGTTCTGGTGTTTGGGAAGTGACCTACACTCTCTTTGACAGAGATTCTCATGATGAGAGTGAGTGCCAATGGCCTGAGAAGTGTGGGAATCTTGGGTTATGTCAGAATGAGCAATGTGTGGCTTGTCCATTGGAAAATGGACTACTTGGATGGAGCAACAACTGCACAGCCAAGAAGGTGACATCATGCAAGGCAAGTGATTTCCACTACTACAAAGTTGAAGGGGTTAGACATTACATGAGCAAATACGCTGAGGGAAGTAAAGTGAGTGAAAGTACCTGTGGAAACAAATGCACTAAGGATTGCAAGTGTGTTGGCTATTTCTACCACAGGGAGAACTCTAGGTGTTGGATAGCTTATGATCTACAAACCCTTGCTAGAGTGGCCAATTCCAAACAAGTGGGATATATTAAGGTGCCTAATTAG 1335 0.4397 MASMPQSKTSLPTFFFFFFSSFTIIHAIVPQNETFKFENSGEFGPYITEYDASYRMQDIFSSPFQVAFYNTTPNAFTLALRMGLRRSEQLFRWVWEANRGNPVGENATFSLGTDGNLVLAEADGRIAWQTNTANKGVVAFKLLPNGNMVLLDAQGKFVWQSFDYPTDTLLIDQYLRAKGPSKLVSRLSERDNVDGPYSLVLEPKRLALYYKSKNSPRPNPYWYRIFTQQGSVENITLTSYPDTFEVEFTYALSSSTSDYRTMAEPLNNIPVGVLGMPVNNSTLSYLRLGIDGNIRLHTYFLNVRSGVWEVTYTLFDRDSHDESECQWPEKCGNLGLCQNEQCVACPLENGLLGWSNNCTAKKVTSCKASDFHYYKVEGVRHYMSKYAEGSKVSESTCGNKCTKDCKCVGYFYHRENSRCWIAYDLQTLARVANSKQVGYIKVPN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0681 444 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 210 IPR036426 -
Pvu5g0681 444 CDD PAN_AP_plant 365 443 - -
Pvu5g0681 444 Gene3D - 45 162 IPR036426 -
Pvu5g0681 444 PANTHER - 16 444 - -
Pvu5g0681 444 SMART blect_4 48 165 IPR001480 -
Pvu5g0681 444 PIRSF SLG 1 444 IPR035446 -
Pvu5g0681 444 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 16 444 - -
Pvu5g0681 444 Pfam D-mannose binding lectin 94 177 IPR001480 -
Pvu5g0681 444 ProSiteProfiles PAN/Apple domain profile. 366 444 IPR003609 -
Pvu5g0681 444 CDD B_lectin 60 165 IPR001480 -
Pvu5g0681 444 ProSiteProfiles Bulb-type lectin domain profile. 44 163 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0681 Pvu-Chr5 10010997 10012331 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0681 - - var:108333417 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0681 5 10010997 10012331 Pvu5g0681 5 10010997 10012331 ECH