Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0678 ATGGCTTCTCTTTCTCTACCCAAAACTTCTTTTCTTCTTGCCTTATTGTTCTTCTCATCTTTCACCCTCATTGTGCATGCAATTGTTCCGCAGAATGAGACCTTCAAATTTGTGAACTCGGGTGAACTTGGACCCTTCATTGTTGAGTACGGTGGTGATTACCGAATGATAAGCATCTTCAACTCTCCTTTCCAAGTTGGTTTCTACAACACCACCCCAAATGCCTTCACTCTAGCTTTGCGTGTTGGACTCCAACGCTCAGAGCAACTCTTTAGATGGGTGTGGGAGGCCAATAGAGGCAACCCAGTTGGAGAGAATGCCACTTTTTCACTTGGAACTGATGGAAACCTTGTGTTGGCTGATGCTGATGGTAGAATTGTTTGGCAAACCAACACTTCCAAAAGAGGTGTTGTGGCCTTCAGATTGCTTCCAAATGGTAACATGGTCCTCCTTGATGCACAGGGAAAGTTTGTTTGGCAGAGTTTTGACCACCCCACAGATACCCTTTTGGTTGGTCAGTATCTTAGAGCAAAAGGACCATCCAAACTGGTTAGTAGGCTTTCAGAGAAGGAGAATGTAGATGGACCTTACAGTTTGGTTTTGGAGCCTAAAGGGTTGGCCTTGTACTACAAGAGCAAGAATTCCCCTAGGCCAATTCTGTATTGGTTTTCATCTGATTGGTTCTCCATTCAACAAGGCTCCTTGGACAATGTCACCTTCACTTCTGATTCAGAGAGTTTTGAAATTGGATTTGATTACTTCGTGGCCAATTCTTCCACCAGTGGCAATAGAATCCTCGGTAGGCCGGTGAACAATAGCACCATAACATACCTCAGGCTTGGAATTGATGGTAACATTAAATTCCACACTTACTTCCTTGATGTGCGTGATGGTGTTTGGCAAGTGACCTACACTCTATTTGACAGAGATTCTGATGAGAGTGAGTGCCAATTGCCTGAGAGATGTGGAAAATTTGGGCTATGTGATGACAACCAATGCGTGGCTTGTCCATTGGAAAATGGACTATTTGGGTGGAGCAACAATTGCACTTCCAAGACTGTGACATCATGCAAGGCAAATGAGTTTCACTACTACAAACTTGAAGGAGTTGAACATTACATGAGCAAGTACACTACAGGGGACAGAGTGAGTGAGAATAACTGTGGAAACAAATGCACTAAGGATTGCAAGTGTGTGGGTTATTTCTACCACCGAGAGAACTCAAGGTGTTGGATAGCTTATGATTTGCAAACCCTCACCAGAGTGACCAATTCCTCACACGTGGGGTATATTAAGGTGCCTAATTAG 1308 0.4388 MASLSLPKTSFLLALLFFSSFTLIVHAIVPQNETFKFVNSGELGPFIVEYGGDYRMISIFNSPFQVGFYNTTPNAFTLALRVGLQRSEQLFRWVWEANRGNPVGENATFSLGTDGNLVLADADGRIVWQTNTSKRGVVAFRLLPNGNMVLLDAQGKFVWQSFDHPTDTLLVGQYLRAKGPSKLVSRLSEKENVDGPYSLVLEPKGLALYYKSKNSPRPILYWFSSDWFSIQQGSLDNVTFTSDSESFEIGFDYFVANSSTSGNRILGRPVNNSTITYLRLGIDGNIKFHTYFLDVRDGVWQVTYTLFDRDSDESECQLPERCGKFGLCDDNQCVACPLENGLFGWSNNCTSKTVTSCKANEFHYYKLEGVEHYMSKYTTGDRVSENNCGNKCTKDCKCVGYFYHRENSRCWIAYDLQTLTRVTNSSHVGYIKVPN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0678 435 Gene3D - 52 163 IPR036426 -
Pvu5g0678 435 ProSiteProfiles PAN/Apple domain profile. 357 435 IPR003609 -
Pvu5g0678 435 PANTHER - 15 435 - -
Pvu5g0678 435 PIRSF SLG 3 435 IPR035446 -
Pvu5g0678 435 ProSiteProfiles Bulb-type lectin domain profile. 32 163 IPR001480 -
Pvu5g0678 435 CDD B_lectin 48 165 IPR001480 -
Pvu5g0678 435 CDD PAN_AP_plant 353 434 - -
Pvu5g0678 435 SMART blect_4 48 165 IPR001480 -
Pvu5g0678 435 PANTHER SECRETED GLYCOPROTEIN EP1, PUTATIVE-RELATED 15 435 - -
Pvu5g0678 435 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 227 IPR036426 -
Pvu5g0678 435 Pfam D-mannose binding lectin 94 178 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0678 Pvu-Chr5 9957832 9959440 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0678 - - gmx:100804561 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0678 5 9957832 9959440 Pvu5g0678 5 9957832 9959440 ECH