Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1696 ATGGAAGCTGCATTAAGCACTGCACTTGCTCTTTCACCCAACCAAGTTTTCAATGCAGTAAATCCTGGAGATAAAAATTTTGGTTTGAAATATTGCAAAGATAGGACTGTTGTAGTGACAATGGCAGCCACTGGAATATTGGGAAAAGGTGGGGGATTGGCTGAGAGGCCAACCATAGAGAAAACAACACCTGGTCGGGAATCTGAATTTGACTTAAGGAAATCGAGGAAAACATCTCCACCATTCCGAGTTTTGCTGCACAATGACAACTTCAACAAGAGAGAATATGTTGTGCAAGTGTTGATGAAGGTGATACCTGGAATGACAATTGATAATGCAGTTAACATCATGCAGGAGGCACATCATAATGGACTAGCAGTGGTGATCATATGTGCTCAAGTGGATGCTGAAGACCACTGCATGCAGTTGAGAGGAAGTGGCCTTTTAAGTTCAATTGAACCAGCTGATGGTGGTGGTTGTTGA 483 0.4265 MEAALSTALALSPNQVFNAVNPGDKNFGLKYCKDRTVVVTMAATGILGKGGGLAERPTIEKTTPGRESEFDLRKSRKTSPPFRVLLHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQEAHHNGLAVVIICAQVDAEDHCMQLRGSGLLSSIEPADGGGC* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1696 160 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Pvu4g1696 160 MobiDBLite consensus disorder prediction 53 74 - -
Pvu4g1696 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 158 IPR022935 GO:0006508
Pvu4g1696 160 Gene3D - 76 154 IPR014719 -
Pvu4g1696 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 158 - -
Pvu4g1696 160 MobiDBLite consensus disorder prediction 60 74 - -
Pvu4g1696 160 SUPERFAMILY ClpS-like 76 153 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1696 Pvu-Chr4 44196511 44199037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1696 K06891 - gmx:100306117 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1696 4 44196511 44199037 Pvu4g1696 4 44196511 44199037 ECH