Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1684 ATGGATGATGATCAATTTCCTCAGATCAAAGGTGTTGTTATAATCTCCCTCCCACCACCAGATAACCCTTCTTTGGGCAAAACCATCACTGCTTTTACTTTCTCTGACCCTTCTTCTCCTCAACCCTCACTACTTCTTCAACAATCCCACCAACACCAAACAAACATCAATGAATACAACAACACTGATCCTCCCCTTCACTCCTACCCATCTAATGCTCAGCTTGGTTTTTCACGCAGAAGACTCTTCCACAGAACCCCAGTGAGGTTTTTCTCCTTCTTTGGGGTTTTTCTATTTGCTCTCTTTCTCTATGGTTCTGTTTCTTCAACCACCACTCTGGAACTGAGTGGCCCCAAGAATGATGGTGATGATGATGGCAAACCCGGATCATATTTGTTCCCTTTGTATCCTAAATTTGGTGTTTTGGGGCAGAAGAATATGAAGCTCCAACTGGGGAAGCTTGTTCATAAAGAAAAGCTTTTGACACAGAGAAAATACAGGGTTGGTTCTGAGGTTGTGGCCGTTGACTCTTCTTCGGTTTTTCCTGTCAGTGGCAATGTTTTTCCAGACGGGTTGTATTTCACTATTTTACGTGTTGGAAATCCTCCAAGAAGTTATTTTCTTGATGTGGATACAGGGAGTGACTTAACTTGGATGCAGTGTGATGCTCCTTGCATAAGTTGTGGAAAGGGAGCTCATGCCCAATACAAGCCAACAAGATCCAATGTAGTACCATCCATGGACTCTCTCTGCTTGGATGTTCAGAAAAATCAGAAAGATGGGCATCACGAAAGCTTGCAACAGTGTGACTATCAAATTGAATATGCGGATCAGAGTTCTTCCTTGGGGGTTCTCATTAGAGATGAGCTTCATCTTGTAACTACTAATGGATCCAAAACCAAGCTAAATTTTGTTTTTGGGTGTGGATATGATCAAGAAGGCTTACTTTTGAACACATTGGCAAAGACAGATGGAATCCTGGGACTGAGCAGGGCAAAAGTGAGCCTACCTTACCAGTTAGCAAGTAAAGGGCTTATTAAGAATGTGGTTGGTCATTGCTTGAGCAATGATGAAGTTGGTGGTGGTTACATGTTCTTGGGTGATGATTTCTTGCCATATTGGGGCATGACTTGGGTTCCCATGGCCTATACCCTTACTACGGATTTATACCAAACTGAGATTCTTGGAATAAATTATGGAAATCGGCAACTCAGTTTTGATGGCCAAAGCAAAGTAGGAAAGGTGGTTTTTGATAGCGGCAGTTCTTATACATATTTCCCAAAAGAAGCATACTTGGATCTTGTTGCTTCTCTTAATGAAGTTTCTGGGTTGAGACTCATTCAAGATGATTCAGATACTACTTTACCCATTTGCTGGGAAGCAAATTTCCCAATCAAATCTGTCAAAGATGTCAAGGATTACTTCAAGACCATAACTCTTCGGTTTGGAAGCAAGTGGTGGATTTTGTCCACAATGTTTCAGATAGCACCAGAGGGTTACTTGATCATTAGTAACAAAGGCCATGTTTGCTTGGGTATCCTTGACGGTAGCAATGTAAACGATGGATCCTCCATTATTCTTGGAGACATTTCATTCAGAGGATACTTAGTTGTGTATGATAACTCAAAGCAAAAAATTGGTTGGAAGCGAGCAGAGTGTGGCATGTCAAGCAGAAGATTGAGAAAGAAAAACAGTTTTGTCCCTGATAGCATGCTATAA 1719 0.4154 MDDDQFPQIKGVVIISLPPPDNPSLGKTITAFTFSDPSSPQPSLLLQQSHQHQTNINEYNNTDPPLHSYPSNAQLGFSRRRLFHRTPVRFFSFFGVFLFALFLYGSVSSTTTLELSGPKNDGDDDGKPGSYLFPLYPKFGVLGQKNMKLQLGKLVHKEKLLTQRKYRVGSEVVAVDSSSVFPVSGNVFPDGLYFTILRVGNPPRSYFLDVDTGSDLTWMQCDAPCISCGKGAHAQYKPTRSNVVPSMDSLCLDVQKNQKDGHHESLQQCDYQIEYADQSSSLGVLIRDELHLVTTNGSKTKLNFVFGCGYDQEGLLLNTLAKTDGILGLSRAKVSLPYQLASKGLIKNVVGHCLSNDEVGGGYMFLGDDFLPYWGMTWVPMAYTLTTDLYQTEILGINYGNRQLSFDGQSKVGKVVFDSGSSYTYFPKEAYLDLVASLNEVSGLRLIQDDSDTTLPICWEANFPIKSVKDVKDYFKTITLRFGSKWWILSTMFQIAPEGYLIISNKGHVCLGILDGSNVNDGSSIILGDISFRGYLVVYDNSKQKIGWKRAECGMSSRRLRKKNSFVPDSML* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1684 572 Gene3D Acid Proteases 171 368 IPR021109 -
Pvu4g1684 572 ProSiteProfiles Peptidase family A1 domain profile. 193 549 IPR033121 -
Pvu4g1684 572 PANTHER ASPARTYL PROTEASE APCB1 16 557 - -
Pvu4g1684 572 PRINTS Pepsin (A1) aspartic protease family signature 199 219 IPR001461 GO:0004190|GO:0006508
Pvu4g1684 572 PRINTS Pepsin (A1) aspartic protease family signature 415 426 IPR001461 GO:0004190|GO:0006508
Pvu4g1684 572 PRINTS Pepsin (A1) aspartic protease family signature 525 540 IPR001461 GO:0004190|GO:0006508
Pvu4g1684 572 PANTHER ASPARTYL PROTEASES 16 557 IPR001461 GO:0004190|GO:0006508
Pvu4g1684 572 Pfam Xylanase inhibitor N-terminal 193 368 IPR032861 -
Pvu4g1684 572 Gene3D Acid Proteases 374 555 IPR021109 -
Pvu4g1684 572 Pfam Xylanase inhibitor C-terminal 401 549 IPR032799 -
Pvu4g1684 572 SUPERFAMILY Acid proteases 184 553 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1684 Pvu-Chr4 44077993 44082897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1684 175 553 Miscellaneous Gene Families AT1G77480 45.812 3.99e-109 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1684 - - gmx:100810687 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1684 4 44077993 44082897 Pvu4g1684 4 44077993 44082897 ECH