Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1667 ATGGCAGGCCACGATTGCGGAAGCCCTCCTCTAGAAAATTTAAGCACTTGTTATTCGTCAAAGCAGAAAACACCTCAGCTGGAATGTCCCTTTTTTGGGTGCGGAGTGTGTTCCAGGAGATGGGTTTTCTCTTCAAAAGATTGTTCTAATTGCATGGGTCAGAACTCAGAATTACAAGATAAGATTGTGGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATCTGGATTTGTATTCTAATATTCCACATAGGTTGTTGAGGTGGGACAGGAGGAAAAGGCTCATACTTGAAGAGATTAATAACTATAACGCCAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATCTAGACAATCTTTTCCAGAACAGTGGCTTTAAAGGTATTTACAAGGCTCGCACTGGGGAAGCACAAGATGGATGTGCTGTATTTTGGAAAGACAAGTTATTCAATCTTTTGCATCAAGAAGATATAGAATTCCAAAGATTTGGCATGCGTAACAATGTTGCCCAGCTGTGTATTTTGGAGGCAAACCATGATAAAAAAGAATCTGACGCATGTAACCTAACCCCAATGGAACCATCCACAGGAAAAAGAAGATTTGTTGTAGGAAACATACATGTGCTGTTCAACCCAAATCGTGGTGACATTAAACTGGGCCAGGTCAGAATTTTACTTGACAAAGCTTACAAGTTGTCACAAAAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCACAGAGTGCCATATATAAGTTTCTGTCTTCGTCAAAGCTAGACATCCAATTACATGATCGCCGAAATATGTCAGGACAGCTTGAAATCCAGTCCAACAGAATCTTCAGATCACAGATTCCTGATGATGCCAGCATTTCGATGACTCTCTCAAGGCAATTGTTATATAGATGGAGTGTGGAAGAACTAAGACTTGCAACAGGGGCGAAAGGAATTACTCATCTTCAGCACCAGCTCAAACTCCGTAGTGCCTATAGTGGTGTTCCTGGTGACCATAAAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCTGATGATCTTGTTCCACTTAGAGTTCTTGAAACCTTGCCAATTGATATTCTTAGAAGATCTGGAGGACTCCCTAGTGAGAAATGGGGAAGTGATCACCTAGCTGTTGTATGTGAGTTGGCTTTTAGCAAACAACAACAATGTATGAGGTCTGAACCTTAA 1284 0.4065 MAGHDCGSPPLENLSTCYSSKQKTPQLECPFFGCGVCSRRWVFSSKDCSNCMGQNSELQDKIVVVSYNILGVENASNHLDLYSNIPHRLLRWDRRKRLILEEINNYNASILCFQEVDHFNDLDNLFQNSGFKGIYKARTGEAQDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCILEANHDKKESDACNLTPMEPSTGKRRFVVGNIHVLFNPNRGDIKLGQVRILLDKAYKLSQKWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIQSNRIFRSQIPDDASISMTLSRQLLYRWSVEELRLATGAKGITHLQHQLKLRSAYSGVPGDHKTRDDIGEPLATSYHSKFMGTVDYIWHSDDLVPLRVLETLPIDILRRSGGLPSEKWGSDHLAVVCELAFSKQQQCMRSEP* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1667 427 PANTHER PROTEIN ANGEL 38 416 - -
Pvu4g1667 427 Pfam Endonuclease/Exonuclease/phosphatase family 66 407 IPR005135 GO:0003824
Pvu4g1667 427 Gene3D Endonuclease/exonuclease/phosphatase 36 426 IPR036691 -
Pvu4g1667 427 SUPERFAMILY DNase I-like 60 415 IPR036691 -
Pvu4g1667 427 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 38 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1667 Pvu-Chr4 43957386 43963838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1667 92 266 EF-hand Containing Proteins AT5G54130 25.543 1.64e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1667 - - vra:106769764 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1667 4 43957386 43963838 Pvu4g1667 4 43957386 43963838 ECH