Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1650 ATGGCGGCGAAAAGATTGTTCAATGATTCTCAACGAGACCCTGATGATAAGCCAGACGACAAACGGATGAGAAATAACACTGCTAGACCGTCTTTTGCTTCTGTAATTGGAGATGTGGTCATGGTAAATAACTTGGAGCATCTTTTCACTGCCTTGGAACCTGTGCTTAGAAGAGTGGTGAGTGAGGAACTTGAGGGAGGTTTGAGACGGTGGTCACTCTCCCATAGGTCTCCTTCATTGAGACTTCGAGCAATGGAGCAGCCATCAAGCTTGCAACTAGGGTTCAGCAAGAGGCTTTTCCTTCCAATTTTCACAAGTAGCAGGATTCTTGACTTTGAAGAGAACCCCATGAGCATAGTTCTGATGGAAAAAAGCAACAATAACCAAATGGTACCCACAAGTCTCCCACATGCCATCAAGCTAGAGATTGTGGCTCTTGATGGAGATTTTACTCCTTCTGAAAACGAGGGTTGGACGAGTGATGAATTTAACAGACACATATTGAAAGAGAGACCGGGGAAGAGACCTTTACTTGCAGGAGAATTGAACTTGATCATGCGAGATGGAATTGCACCAACTGGGGACATGGAATTCACAGATAACTCTAGCTGGATTCGCTGCAGAAAGTTCAGAGTTGCAGTGAGAGTAGCACCAGGAAGTACTCAAGGAGTTCGGATTCGTGAAGGAATGACTGAAGCATTTGTTGTCAAGGATCACCGTGGAGAATTGTACAGAAAACGCTACCCTCCAATGCTTCATGACGAAGTGTGGCGCCTGGAAAAGATCGGTAAAGATGGACCTTACCACAAAAAGTTGTCTTCTGAGGGCATAAAAACAGTCCAAGAATTTCTTAAACTAGCAGTTGTTGATGTTCTTAAGCTAAGAAATATTTTGGGCGTGTCGATGTCAGACAAAATGTGGGAAGTGGCAATCAAACATGCAATGAGTTGTGAGATGGGGAGCAAGTTGTACATTTATCATGGACCACACTTTACTATTTTTCTGGATCCAATTTGCAAATTAGTTAGAGCAGAGGTCAATGGACAGACATTTTCAAACAGAGATCAAATTCCCCATTTGAACAAGGCTTACATAGACAAATTGGTGAGAGAAGCATATGCAAAATGGCCTAACTTGGAGGAGATAGATGGGGTTCTGAACGATAACATTGCTGTTTTAATCCAAGGTGATCAACCTTCTGCATCAGTAGTGACATATGATCAGAATCATTATTACAGTGAGAAATCTGGCAGCTATGTTGCAAATAACAACACACAAATGGGATGCGAGTGGTCACTGAATCAACCCTACAGCACAGAAGCGTTTGGTAATGAGTTTCCTTTTAGTTTCTCAGCAACACAGACAGATGGAGACATGACCGCTTCAGGTTCTAGCTCTGTGGATGTTGATGGAGCCACAACAAGGCACAACTAG 1434 0.431 MAAKRLFNDSQRDPDDKPDDKRMRNNTARPSFASVIGDVVMVNNLEHLFTALEPVLRRVVSEELEGGLRRWSLSHRSPSLRLRAMEQPSSLQLGFSKRLFLPIFTSSRILDFEENPMSIVLMEKSNNNQMVPTSLPHAIKLEIVALDGDFTPSENEGWTSDEFNRHILKERPGKRPLLAGELNLIMRDGIAPTGDMEFTDNSSWIRCRKFRVAVRVAPGSTQGVRIREGMTEAFVVKDHRGELYRKRYPPMLHDEVWRLEKIGKDGPYHKKLSSEGIKTVQEFLKLAVVDVLKLRNILGVSMSDKMWEVAIKHAMSCEMGSKLYIYHGPHFTIFLDPICKLVRAEVNGQTFSNRDQIPHLNKAYIDKLVREAYAKWPNLEEIDGVLNDNIAVLIQGDQPSASVVTYDQNHYYSEKSGSYVANNNTQMGCEWSLNQPYSTEAFGNEFPFSFSATQTDGDMTASGSSSVDVDGATTRHN* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1650 477 MobiDBLite consensus disorder prediction 453 477 - -
Pvu4g1650 477 Pfam Calmodulin binding protein C-terminal domain 322 382 IPR046829 -
Pvu4g1650 477 MobiDBLite consensus disorder prediction 453 471 - -
Pvu4g1650 477 MobiDBLite consensus disorder prediction 8 26 - -
Pvu4g1650 477 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Pvu4g1650 477 PANTHER OS02G0177800 PROTEIN 1 467 IPR012416 GO:0005516
Pvu4g1650 477 MobiDBLite consensus disorder prediction 1 28 - -
Pvu4g1650 477 PANTHER PROTEIN, PUTATIVE-RELATED 1 467 - -
Pvu4g1650 477 Pfam Calmodulin binding protein-like N-terminal domain 91 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1650 Pvu-Chr4 43791913 43796358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1650 7 413 Calmodulin-binding Proteins AT5G57580 43.614 6.01e-107 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1650 - - gmx:100803213 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1650 4 43791913 43796358 Pvu4g1650 4 43791913 43796358 ECH
Pvu2g3273 2 47829516 47833578 Pvu4g1650 4 43791913 43796358 PCT