Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3273 ATGGCTGCCAAACGCTTTTTGGATGATTCTGATCAAGATACCAATAAGAATGGTGATAAACGGATGAGACCTGCACCAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTCGTCATGGTGAAGAACTTGCAGAACCTTTTCTCAGGCTTGGAACCCTTGCTTAGGAGAGTGGTGAACGAAGAGGTGGAGCGAGTGATGATGCATTGTGTTCCACGTTCAATAACCAGGTCCCCTTCGTTGAGGATCGAAGCAATGGAGCAACCAACAAGCTATGAACTCATGTTCGAGAAGAAGCTATTGCCCAAGATATTCACAGGAAGCAGAATAGTAGACACGGATGGGAACCCCATCCTTGTTGTTCTTGTTGACAAAAGCGGTGGTCAAAGGGTTCGCACCAGTCTCCCCCACCCCATCAAGCTAGAAATCGTGGTGCTTGATGGAGATTTTCCTTCCAATAGTAGTGATAACAACGAGTCATGGACGAGTGAAGAATTCAACAACCGCATAGTGAAGGAGAGAACAGGAAAGAGGCCGTTGCTGGCAGGAGAATTGAATCTGACCATGAGGAATGGGATTGCACCAATTGAAGACATTGAATTCACTGATAATTCCAGTTGGATAAGAAGCAGGAAGTTCAGAGTTGCTGTCAGAGTTGCTCCTGGGACTAATCAAACTGTTAGAATTCGTGAAGGCATGACAGAACCAATTGTTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACATCACCCACCTATGCTCAACGACGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGACGGAGCTTTCCACAAAAAACTGTCCAGAGAGGGAATAAACACTGTGCAAGACTTTCTCAAGTTATCTGTTGTTGATGCCCAGAGGCTCAGAAAGATTTTGGGCGTTGGGATGTCAGAGAGAATGTGGGATGTGACAATCAAGCATGCAAAGACCTGTGAGAAGGGCAACAAATACTATGTCTACCGTGGGCATAATTTTACCATCTTTATGAATTCCATATGCCAATTGCTTAGAGCTGATATCAATGGCCAAAGTTTTCCAGGAAGAGAGCTAAGCAACCTCACAAGGAGCTATATGGAAAGATTGGTGAGAGAAGCATATGCTAAATGGAATCAGTTGGAGGAAATTGACGGGGCTTTGTTAAGCCAAGGTGAGAGCATGGAGCAAATTCCAAACAATCTTCAAGCATCAGTTATAGCATATGATCAGAACGACTACTTTGGTAATACCTCTGCAGAAGGAGGCAACTATGTACCAACCCATAATGCAGAAATTGGGTGCAGTGAGTGGGGTGTGAATGCAACATTTGCCACAACATCCTTAATAAGTGGCATACCTTACAGCTTCACAGATTCACAATCTGACAGTGGCATAAGGCCCTCAGTTGATGGTGCCACAAGGTGGAACTAG 1431 0.4465 MAAKRFLDDSDQDTNKNGDKRMRPAPRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERVMMHCVPRSITRSPSLRIEAMEQPTSYELMFEKKLLPKIFTGSRIVDTDGNPILVVLVDKSGGQRVRTSLPHPIKLEIVVLDGDFPSNSSDNNESWTSEEFNNRIVKERTGKRPLLAGELNLTMRNGIAPIEDIEFTDNSSWIRSRKFRVAVRVAPGTNQTVRIREGMTEPIVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSREGINTVQDFLKLSVVDAQRLRKILGVGMSERMWDVTIKHAKTCEKGNKYYVYRGHNFTIFMNSICQLLRADINGQSFPGRELSNLTRSYMERLVREAYAKWNQLEEIDGALLSQGESMEQIPNNLQASVIAYDQNDYFGNTSAEGGNYVPTHNAEIGCSEWGVNATFATTSLISGIPYSFTDSQSDSGIRPSVDGATRWN* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3273 476 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
Pvu2g3273 476 MobiDBLite consensus disorder prediction 1 26 - -
Pvu2g3273 476 PANTHER PROTEIN, PUTATIVE-RELATED 1 470 - -
Pvu2g3273 476 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Pvu2g3273 476 Pfam Calmodulin binding protein-like N-terminal domain 91 241 IPR046831 -
Pvu2g3273 476 MobiDBLite consensus disorder prediction 1 23 - -
Pvu2g3273 476 PANTHER OS02G0177800 PROTEIN 1 470 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3273 Pvu-Chr2 47829516 47833578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3273 3 388 Calmodulin-binding Proteins AT5G57580 47.570 2.63e-115 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g3273 - - vra:106766894 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3273 2 47829516 47833578 Pvu4g1650 4 43791913 43796358 PCT