Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1629 ATGTTGAATATAAATGGTGGAGTTATTACACAATATATCAGTCAAGAAGGAACTATGGCCAACGATATTTCATCTGATTCTGATAATGAAATTATCGGAGCACGAGTAAAGCTCTTTGGACATGAACAACCGATACATCAACTTCTTGGAGGAGGAAAAGTGGCAGATATGCTATTATGGAGGGACAGAAATTTATCAGCTGCAGTTTTGGGAGGAATGACAGTGATATGGTTTCTATTTGAGATTGCTGAGTACAATTTGGTGACTTTCCTTTGTCACATTTCCATCACCACGATGCTTGTGCTGTTCATATGGTCCACGGCTGCAGATATATTAAAATGGACACCTCCCCGGATTCCAGACATTATTCTAAAAGAATCTTTCTTCCAAGATCTTGCTTTCATTCTCCACAGAAGATTTAACCAGTTATTACCAATGCTCCTCTATATTTCATGTGGAATAGACCTGCCAATATTTCTTCTGAACATTGTGTCCCTCTATATTCTGTCTGTGATTGGAAGCTACATCAGCTTTGTCAATCTGCTATATATTGGTTTTCTCTGCGTGCACACGCTGCCAATTGTGTATGAACGGTATGAGGAAGAAATCAACAATTGGGTGAGCGATATGATAATAGTTCTCAGAAAAAACTACAGGAGTTTTAGGAAGGAGTACCTCAGCAAAATTCCAAGAGGACCAGTGAAGGCAAAGAAAAGCCAATAA 723 0.3887 MLNINGGVITQYISQEGTMANDISSDSDNEIIGARVKLFGHEQPIHQLLGGGKVADMLLWRDRNLSAAVLGGMTVIWFLFEIAEYNLVTFLCHISITTMLVLFIWSTAADILKWTPPRIPDIILKESFFQDLAFILHRRFNQLLPMLLYISCGIDLPIFLLNIVSLYILSVIGSYISFVNLLYIGFLCVHTLPIVYERYEEEINNWVSDMIIVLRKNYRSFRKEYLSKIPRGPVKAKKSQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1629 240 Pfam Reticulon 54 208 IPR003388 -
Pvu4g1629 240 ProSiteProfiles Reticulon domain profile. 54 240 IPR003388 -
Pvu4g1629 240 PANTHER RETICULON 24 238 IPR045064 GO:0009617
Pvu4g1629 240 PANTHER RETICULON-LIKE PROTEIN B9 24 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1629 Pvu-Chr4 43576099 43578414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1629 - - pvu:PHAVU_004G154000g 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1629 4 43576099 43578414 Pvu4g1629 4 43576099 43578414 ECH