Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1623 ATGCTTCTTAATCACGTTGCCGCCGGATTCTGTTGGGTCGACCCGCCGCAACCCGACCGGAACCACAAAACCCGACTCGCTTCCTCGCCTTTCCGTCGCCGGCTGGTGGCGCCGACGAGTGCGGCGTTCCACGGCGTGCGAATGGAGAAGAAAGACCGCAAACGGCGATCGATATGCACCGCCGACGAGCTTCACCGCGTGGTGGTTTCGAACTCCGATTGGAAGCTCGCTCTGTGGCGCTACCTTCCTTCTCCTGAGGCACCGTTGAGGAATCACCCGCTTTTGTTGTTGTCAGGAGTTGCTACCAATGCAATTGGCTATGATCTCTCTCCTGAGTCTTCATTTGCTCGGTACATGTCGGCACAAGGTTTTGATACGTGGATTCTTGAGGTTCGCGGTGCTGGGTTGAGCACTATTGGAGATAGCTTGGAGGAAGATGACGAATGCCTAAAGAATTTGTCTGAGATTGATTCTGCTATTAGGGATGAAATTGGTAAAAGCAGTGCTTCTCCAGCAAGAGTAATGGGATTTAAGGACCTTGGCTCCCCTGAGGTTATAACTAAATTTGAGGAAATGAGGCTAACAAGGAGGTTAATGGACATTTTTACAAGGATATCTGAAAATCTTGCAGGCTTTCTCAATCCGGATTTGTTGGAGGGAGGAAAGAACTCTGCAATTGTTGGTCAAATCAAGGATTTCAATAGGAGACTCCGAGCTATTATTGAAGGTCAACAGTTGTTCCCAGCACAGATTTTAGAATTGCAAGACCGATTTTCTACCACTCTAGAAGAGTTTCAGAAACAGCTTCAGTTGATTGTTAAGTATGATTGGGACTTTGACCATTATCTGGAAGAGGATGTACCTGCAGCGATGGAGTACATAAGAGCTCAATGTCAGCCAAAGGATGGAAAATTGCTGGCAATTGGTCACTCAATGGGGGGTATCTTGCTGTATGCAAAGCTTTCACGTTGTTATTCTGAAGGAAAGGACTCTGGACTGGCATCTGTTGTTACTTTGGCATCATCACTTGATTATACCCCTTCAAGATCATCTCTCAAGTTGCTTTTACCCCTGGCAAAACCTGCTCAGGCTTTGAACATTCCTGCTATTCCAGTTGGGCCATTGTTGGCCACTGTTTATCCCCTTGCAAGCTACCCTCCGTATGTTTTATCTTGGCTGAACTCTCAGATTTCAGCTCAAGATATGATGGATCAAAAGCTATTTGAGAAGCTTGTTTTGAACAACTTCTGTACCATACCTGCCAAGCTTCTCTTGCAGTTATCATCAGCTTTCCAAGAAGGTGGTTTACGTGACAGGAGTGGAACATTCTTGTACAAGGACCATCTCTGCAAAATTAATGTTCCTGTCTTGGCCATAGCGGGTGACCAAGACTTGATCTGCCCTCCTGAAGCTGTATATGAAACGGTGAAGCTTATTCCTGAAGAATTGGTTACATACAAAGTCTTTGGGGAGCTTGGTGGTCCACACTATGCCCACTATGACTTAGTGGGTGGTCGTCTGGCTGCAGATGAACTGTATCCATGTATAACAGAATTTCTCATTCAACATGACATGCTTTAG 1581 0.4624 MLLNHVAAGFCWVDPPQPDRNHKTRLASSPFRRRLVAPTSAAFHGVRMEKKDRKRRSICTADELHRVVVSNSDWKLALWRYLPSPEAPLRNHPLLLLSGVATNAIGYDLSPESSFARYMSAQGFDTWILEVRGAGLSTIGDSLEEDDECLKNLSEIDSAIRDEIGKSSASPARVMGFKDLGSPEVITKFEEMRLTRRLMDIFTRISENLAGFLNPDLLEGGKNSAIVGQIKDFNRRLRAIIEGQQLFPAQILELQDRFSTTLEEFQKQLQLIVKYDWDFDHYLEEDVPAAMEYIRAQCQPKDGKLLAIGHSMGGILLYAKLSRCYSEGKDSGLASVVTLASSLDYTPSRSSLKLLLPLAKPAQALNIPAIPVGPLLATVYPLASYPPYVLSWLNSQISAQDMMDQKLFEKLVLNNFCTIPAKLLLQLSSAFQEGGLRDRSGTFLYKDHLCKINVPVLAIAGDQDLICPPEAVYETVKLIPEELVTYKVFGELGGPHYAHYDLVGGRLAADELYPCITEFLIQHDML* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1623 526 SUPERFAMILY alpha/beta-Hydrolases 66 521 IPR029058 -
Pvu4g1623 526 Gene3D alpha/beta hydrolase 61 163 IPR029058 -
Pvu4g1623 526 PANTHER LYSOSOMAL ACID LIPASE-RELATED 35 523 - -
Pvu4g1623 526 Gene3D alpha/beta hydrolase 262 521 IPR029058 -
Pvu4g1623 526 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 35 523 - -
Pvu4g1623 526 PIRSF UCP031088_abhydr 20 216 IPR016969 -
Pvu4g1623 526 PIRSF UCP031088_abhydr 184 526 IPR016969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1623 Pvu-Chr4 43496227 43500992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1623 - - gmx:100808317 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1623 4 43496227 43500992 Pvu4g1623 4 43496227 43500992 ECH