Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu4g1598 | ATGGCACAGAGTCGGAAAGCTAAAACCCTGTGTGCGTGGATCCACCAAACCCACATAAACCCTTCCAATTCTCAACGACCGAAGCCATCGTCACACAGTGAAAGTCAGAGATCTGAATCGATTCTCCGACGCCACGCTATGAGAAGGGTTCCATCCATTCTGTTCAGAACGCTCGCAGCCACACGCGCCACACGCGCCACCTCATACGTCGTCCACAACCGCCTTCTCCACGGCAGCGCCGCCACCGCCGCCGCCCACTCACACAGTCGCCGCTTCTCCTACCTCCTCGCTCCCTTCGCCGCAGCGTCTATCGGCGTCGCCGGCGCCCTCGTCTCTCAGGAAGTCCTCGCCAAGGAGCCTCCGCCGCCCGAGGCTCTTCCACGCGACGTCGTTCTCTACCAGTTCGAGGCTTGCCCTTTCTGCAACAAAGTCAAAGCATTTTTGGACTACCATGATATACCTTACAAAGTTGTGGAAGTCAACCCTCTTAGCAAGAAAGAAATCAAATGGTCCGAGTATCAGAAAGTGCCGATATTGGTGGTAGATGGCGAGCAGCTAAATGATTCATCAGCTATAATTGATCAGCTGGGACTTAAGATTCTGTCGAAGAAAATTGCAGATTCAACTTCTGAGGATGAAGAGACAAAATGGCGAAGGTGGGTTGATAACCATTTGGTGCATGTTCTATCACCAAATATTTATCGAAATACATCTGAAGCACTTGAATCCTTTGAGTATATTACTAGCAATGGAAATTTCAGCTACATAGAAAAAATTTCGGTGAAGTTTGCTGGAGCTGCAGCTATGTATTTTGTGTCTAAGAAGCTGAAGAAGAAATACAACATAACTGATGAACGTGCTGCCCTTTATGAGGCAGCAGAAACATGGGTAGAAGCTCTGAATGGCCGGGAATTCCTTGGTGGCTCTAAACCTAACTTAGCCGACCTGGCAGTCTTTGGGGTTCTAAAACCCATACGGTATTTGAGGTCTGGCAAGGATATGGTGGAGCACACTCGTATTGGTGAGTGGTATGCAAGAATGGAGAGTGCTGTTGGAGAACCCTCCAAGATTAAAGCCTAA | 1080 | 0.4907 | MAQSRKAKTLCAWIHQTHINPSNSQRPKPSSHSESQRSESILRRHAMRRVPSILFRTLAATRATRATSYVVHNRLLHGSAATAAAHSHSRRFSYLLAPFAAASIGVAGALVSQEVLAKEPPPPEALPRDVVLYQFEACPFCNKVKAFLDYHDIPYKVVEVNPLSKKEIKWSEYQKVPILVVDGEQLNDSSAIIDQLGLKILSKKIADSTSEDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFEYITSNGNFSYIEKISVKFAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVEALNGREFLGGSKPNLADLAVFGVLKPIRYLRSGKDMVEHTRIGEWYARMESAVGEPSKIKA* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu4g1598 | 359 | Pfam | Glutathione S-transferase, C-terminal domain | 268 | 349 | IPR004046 | - | |
| Pvu4g1598 | 359 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 128 | 204 | IPR004045 | - | |
| Pvu4g1598 | 359 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
| Pvu4g1598 | 359 | SUPERFAMILY | Thioredoxin-like | 129 | 199 | IPR036249 | - | |
| Pvu4g1598 | 359 | SUPERFAMILY | GST C-terminal domain-like | 207 | 351 | IPR036282 | - | |
| Pvu4g1598 | 359 | PANTHER | PROSTAGLANDIN E SYNTHASE 2-RELATED | 81 | 359 | - | - | |
| Pvu4g1598 | 359 | ProSitePatterns | Glutaredoxin active site. | 132 | 148 | IPR011767 | - | |
| Pvu4g1598 | 359 | PANTHER | MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 | 81 | 359 | - | - | |
| Pvu4g1598 | 359 | CDD | GST_C_mPGES2 | 210 | 353 | IPR034335 | - | |
| Pvu4g1598 | 359 | Gene3D | - | 207 | 357 | - | - | |
| Pvu4g1598 | 359 | MobiDBLite | consensus disorder prediction | 17 | 42 | - | - | |
| Pvu4g1598 | 359 | SFLD | Prostaglandin E synthase like.1 | 106 | 358 | IPR034334 | GO:0050220 | |
| Pvu4g1598 | 359 | ProSiteProfiles | Glutaredoxin domain profile. | 118 | 216 | - | - | |
| Pvu4g1598 | 359 | Pfam | Glutathione S-transferase, N-terminal domain | 132 | 196 | IPR004045 | - | |
| Pvu4g1598 | 359 | Gene3D | Glutaredoxin | 124 | 203 | - | - | |
| Pvu4g1598 | 359 | SFLD | Prostaglandin E synthase like | 106 | 358 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu4g1598 | Pvu-Chr4 | 43189964 | 43196091 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu4g1598 | K05309 | - | gmx:100775694 | 533.872 |
Event-related genes