Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1590 ATGGCGGATCAGAGCCCCAAACCAGAGACCTTTGAGCTCAGCAATGGCAGCATGAAGGTTCTTCTCACCAATCTCGGATGCACCATCATCTCCTTATCTGTTCCCGGAAAAGATGGGGTGTTATCCGACGTCGTTCTTGGCCTCGATTCTGTTGAATCCTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCCAACCGAATCAAGGATGGCAAATTTACACTTGATGGAGTTCAGTACTCTTTGCCTCTGAACAAACCCCCAAACAGTCTCCATGGTGGAAATGTTGGGTTTGATAAGAAGGTATGGGAGGTAGTTGAACATAAAAAGGGCGAAACCCCCTCAATTACTTTCAAGTATCACAGTCACGATGGAGAGGAAGGTTATCCTGGGGATATCACCATTACAGCCACTTACACACTCACCTCAAGCACAACTCTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAACCCACCATAGTTAATTTGGCTCAGCATACCTACTGGAACTTAGCTGGTCACAACTCAGGGAACATTCTTGACCATTCAATTCAGATATGGGCTAATCATGTCATTCCTGTGGACCAGAATACTGTGCCAACTGGTGAAATAATGTCAGTGAAGGATACCCCTTTTGATTTTACATCTGAGAATAGAATAGGCAACAACATTAGTGAGGTTGGATTGGGATATGACCACAATTATGTGCTTGATTGTGGAGAAGAGAAAGATGGTTTGAGGCATGCTGCAAAAGTGAGGGATCCATCAAGTTCAAGAGTACTTAACTTATGGACAAATGCCCCTGGTGTGCAATTTTACACTGCAAACTATGTTAATGGTGTTCAAGGAAAAGGAGGGGCCATATATGGAAAGCATGCAGGGTTATGTCTGGAGACACAAGGATTCCCTAATGCCATAAACCAGCCAAATTTTCCATCTGTTGTGGTTCGTCCAGGTGAGAAGTATGAACACACCATGTTGTTTGAGTTTTCACTTGAGTGA 1020 0.4441 MADQSPKPETFELSNGSMKVLLTNLGCTIISLSVPGKDGVLSDVVLGLDSVESYQKGLAPYFGCIVGRVANRIKDGKFTLDGVQYSLPLNKPPNSLHGGNVGFDKKVWEVVEHKKGETPSITFKYHSHDGEEGYPGDITITATYTLTSSTTLRLDMEGVPKDKPTIVNLAQHTYWNLAGHNSGNILDHSIQIWANHVIPVDQNTVPTGEIMSVKDTPFDFTSENRIGNNISEVGLGYDHNYVLDCGEEKDGLRHAAKVRDPSSSRVLNLWTNAPGVQFYTANYVNGVQGKGGAIYGKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYEHTMLFEFSLE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1590 339 PANTHER ALDOSE-1-EPIMERASE 9 338 - -
Pvu4g1590 339 PANTHER ALDOSE 1-EPIMERASE 9 338 - -
Pvu4g1590 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Pvu4g1590 339 PIRSF GALM 2 339 IPR015443 GO:0016853|GO:0019318
Pvu4g1590 339 SUPERFAMILY Galactose mutarotase-like 8 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu4g1590 339 CDD galactose_mutarotase_like 11 336 - -
Pvu4g1590 339 Gene3D - 2 338 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1590 Pvu-Chr4 43119230 43122061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1590 7 337 Miscellaneous Gene Families AT3G47800 50.755 2.02e-110 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1590 K01785 - gmx:100776238 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1590 4 43119230 43122061 Pvu4g1590 4 43119230 43122061 ECH