Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1589 ATGGCGTCTCGGAAGGCGATCGGTTTTGTTGGCGTTGACGAGTTCAGCTTGGAGATGGCGTTTTCCGCGATTCGCCATGGATACGATGTGCAAGCTTTTCAGATAAATAGTCCCGTCATTGAAGACATCGTGAAGCTTGGAGGAGTTAGATGTTCAAGCCCTTCGGAAGCTGGGAGAGATGTAACAGCTCTAGTTATCCTAATATCTCACATAGATCAAACTAATGACCTCATTTTCGGAGATGAGGGTGCTTTGAGAGGTCTAAAACCAGATACTGTTCTTATTCTGCGTTCGACCATATTACCATCACTTCTCCATAAACTGGAGAGGGATCTAGCAGAAATTCATGAGATTGCTTATGTTGTTGATGCTTATGTCTCTTATGGGAGATCTGATGATTTGAATGAAAAAGTCATAATAGCATCATCTGGAAGTCTAGATGCCATTGCACGAGCACAGCCTGTTCTCTCTGCAATGTGTGAAAAGCTCTTCACTTTTGAGGGTGAAATTGGTGGTGGCAGCAAGGTTAAAATGGTTAATGTAATGCTCGAAGGCATTCATTTCATTAATGCAGTGGAGGCTCTCTCTCTTGGTGCCAAAATTGGAATTCATCCTTGGATAATCTATGATATAATTTCCAATGCTGCAGGAAATTCATGGGCGTTCAAGAATTATTTACCCCTTTTGTTAAAGGGAGAGGTTAATCATCAAATTCTGAACACTTTTGTTAAGGAGTTGGAAATCATTTTGAATATGTCCAAGTCACTTACTTTTCCACTTCCAATTTTGGCTGCTACTCATCTACAACTTATTCACGGGGTTTCGCTTGTTGATAGTGGAGATGATGTTGCAGCACCGATCAAGGTTTGGGAAAAGGTTTACGGGGTTAACATTTCAGATGCTGAAAAGGCTGATACGTATAACCCAGAGCAACTGGCATCTGAATTTACTACTGATTCTAAGAGTGTGAGAAGGGTTGGTTTTATTGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCACTTACTGAGTTCAGAATTTTGCGTTGTTGGTTATGATGTGTATGAACCAACTCAAAGACGATTTACAAATGCTGGTGGCCTGATTGGAAATTCTCCAGCTGAAGTGAGCAAAGATGTTGATGTTCTCATAATTATGGTCACGAATGAATCACAAGCAGAAAATGTTTTATATGGAGAAAATGGTGCAGTTTCAGCTCTTCCAGCTGGAGCATCTATCATTCTCTCTTCCACGGTTTCCCCTGCATACGTGAGTCAGCTGGAGCATAGATTGCATGATAAGTATTTGAAGTTGGTGGATGCCCCGGTTTCTGGTGGTGTTACGAGGGCCTCATTGGGAACTCTTACGATAATGGCGTCAGGAACTGATGATGCCCTTAAGAGTGCTGGTCAGGTCTTAGCAGCCTTGAGTGAGAAGCTTTATATTATCAAAGGTGGTTGTGGTTCTGGAAGTGGTATAAAGATGATTAACCAATTGCTTGCTGGAGTTCACATTGCCTCAGCTGCTGAGGCAATAGCATTTGCAGCTCGGTTGGGTTTGAATACAAGACTGTTGTTCGATTTTATTGCAATTAGTGGAGGAACTTCCTGGATGTTTGAGAATCGTGGGCAACACATGATAGACAATGATTACACGCCATGTTCAGCACTTGATATCTTTGTGAAGGACATGGGAATTGTTACTCGTGAATCATCTGCATGGAAAGTTCCACTTCAGCTATCAACTATTGCTCACCAACTATATCTGGCAGGTTCTGCTGCTGGCTGGGGGCGGATTGATGATGCTGGTGTTGTCAAGGTTTACGAGATGCTAACTGGTGTAAGAGTTGAAGGAAAAATCCAAGCTCAAAGGAAAGATGCCATGTTACATTCTCTTCCACCAGAGTGGCCCGAAGATCATGTTCTTGATATACAAACACTAAAAGAAAGCAATTCAAAGATTTTAGTTGTATTAGATGATGATCCGACAGGAACACAAACTGTTCATGATATTGAGGTATTAACAGAATGGACCATTGAGTCACTGGTGGAGCAGTTTAGAAAAAGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGAGTTCTGACAAGGCCAGTGCACTGATAAAAGAGATTTGCAGAAATCTGGACATTGCTGCAAAATCAATTGACAGCATTGACTATTCCGTAGTTTTGAGGGGAGATTCAACTTTACGAGGTCATTTTCCAGAGGAAGCAGATGCGGTTGTTTCAGTATTGGGTGAAATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGGGGTCGTTACACTATTGCAGACACACACTATGTTGATGATTCTGATACGCTTGTTCCTGCAGGGGACACAGAGTTTGCTAAAGATGCTTCCTTTGGCTACAAATCTTCAAACCTGCGTCATTGGGTAGAGGAGAAGACAAATGGCCGAATACTTGCAAGTAGTGTTGCATCTGTTTCTATCCAACTTTTGAGGAAAGGAGGTCCAAATGCAGTTGCTAAGCATCTATGCAGTTTGCAGAAGGGGACAATATGCGTAGTTAATGCAGCTAGTGAACGAGACATGACTGTTTTTGCTCTTGGAATGATCAAGGCAGAATTGACAGGAAAACGTTTCTTGTGTCGCACTGCTGCTAGTTTTGTCTCTGCACTTATGGGAATCATCTCTAAGCCACCAATATTGCCAAGTGATCTAGGAATAGCTAGAGAAAAGAATGGTGGTCTGATAGTTGTGGGATCCTATGTTCCAAAAACAACAAAGCAGGTTGAAGAACTCAAACTACAGTGTGGTCAGTTCTTAAAAAGCATTGAGGTATCAGTTGAAAAACTTGCAATGAGCCCTATGGAAGAGAGGGAGGAAGAAATCAGTAGAACAGCTGAATTAGCAGACTTATATCTTAAAGTTCATAAAGACACTTTAATAATGACCAGCCGAAATCTCATAACTGGAAGAACTGCAGCTGAGAGTTTGGACATTAACTTTAAAGTGAGTTCCGCTTTGGTGGAAATAGTGAAAAGAGTAACTACAAAACCTCGCTATATTATTGCAAAGGGTGGTATTACGTCTTCAGACCTCGCTACAAAAGCCCTTGGTGCAAGATGTGCGAAGATAGTTGGGCAAGCACTTGCTGGTGTTCCCCTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGAATTCCTTACATTGTCTTCCCTGGTAATGTTGGTAACAGCACAGCATTGGCAGAAGTTGTCAAGTCCTGGACTTACTCAATCAGATTTACATCAACGAAAGAAATTCTTAATAATGCAGAAAAGGGTGGTTATGCTGTTGGAGCATTTAATGTCTACAATTTGGAAGGAGCTGAGGCTGTTGTTTCTGCTGCTGAGGAAGAACAAAGTCCTGCTATATTACAGATCCATCCAGGGGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAAAGCAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAACTTTAAAGCAGGATCTTGTGGAAGCTCTTGACCTGGGATTCAGTTCCATAATGGTTGATGGTTCACATCTTTCTTTCAATGAAAATGTTGCATACACACAATTTATAACATTACTGGCGCACTCAAAAAATATGCTGGTTGAAGCTGAGCTAGGAAGATTGTCAGGGACAGAAGATGATTTAACTGTAGAAGAGTTTGAAGCCAGACTAACAGATGTGAATATGGCATCAAAATTCATAGATGAGACTGGAATAGATGCTTTGGCAGTGTGTATTGGTAATGTGCATGGAAAGTACCCAGCAAGTGGTCCAAATCTCAGAGTTGACCTGCTTAAGGAGCTGCATGCTTTGAGCCTGGAGAAAGGAGTTCATCTGGTGCTTCATGGTGCTTCTGGTTTGAGCGAAGAACTTGTTAAGGAGTGCATAAATCTTGGTGTTAGAAAGTTCAATGTGAACACTGAAGTAAGGAAAGCATACATGGACTCTCTGATTACCCCCAAGAACGATCTAGTTCATGTCATGGCTTCTGCAAAGGAAGCCATGAAGGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAAGGCATAA 4125 0.4199 MASRKAIGFVGVDEFSLEMAFSAIRHGYDVQAFQINSPVIEDIVKLGGVRCSSPSEAGRDVTALVILISHIDQTNDLIFGDEGALRGLKPDTVLILRSTILPSLLHKLERDLAEIHEIAYVVDAYVSYGRSDDLNEKVIIASSGSLDAIARAQPVLSAMCEKLFTFEGEIGGGSKVKMVNVMLEGIHFINAVEALSLGAKIGIHPWIIYDIISNAAGNSWAFKNYLPLLLKGEVNHQILNTFVKELEIILNMSKSLTFPLPILAATHLQLIHGVSLVDSGDDVAAPIKVWEKVYGVNISDAEKADTYNPEQLASEFTTDSKSVRRVGFIGLGAMGFGMATHLLSSEFCVVGYDVYEPTQRRFTNAGGLIGNSPAEVSKDVDVLIIMVTNESQAENVLYGENGAVSALPAGASIILSSTVSPAYVSQLEHRLHDKYLKLVDAPVSGGVTRASLGTLTIMASGTDDALKSAGQVLAALSEKLYIIKGGCGSGSGIKMINQLLAGVHIASAAEAIAFAARLGLNTRLLFDFIAISGGTSWMFENRGQHMIDNDYTPCSALDIFVKDMGIVTRESSAWKVPLQLSTIAHQLYLAGSAAGWGRIDDAGVVKVYEMLTGVRVEGKIQAQRKDAMLHSLPPEWPEDHVLDIQTLKESNSKILVVLDDDPTGTQTVHDIEVLTEWTIESLVEQFRKSPKCFFILTNSRSLSSDKASALIKEICRNLDIAAKSIDSIDYSVVLRGDSTLRGHFPEEADAVVSVLGEMDAWIICPFFLQGGRYTIADTHYVDDSDTLVPAGDTEFAKDASFGYKSSNLRHWVEEKTNGRILASSVASVSIQLLRKGGPNAVAKHLCSLQKGTICVVNAASERDMTVFALGMIKAELTGKRFLCRTAASFVSALMGIISKPPILPSDLGIAREKNGGLIVVGSYVPKTTKQVEELKLQCGQFLKSIEVSVEKLAMSPMEEREEEISRTAELADLYLKVHKDTLIMTSRNLITGRTAAESLDINFKVSSALVEIVKRVTTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGVPLWQLGPESRHPGIPYIVFPGNVGNSTALAEVVKSWTYSIRFTSTKEILNNAEKGGYAVGAFNVYNLEGAEAVVSAAEEEQSPAILQIHPGALKQGGIPLVACCISAAKQASVPITVHFDHGTLKQDLVEALDLGFSSIMVDGSHLSFNENVAYTQFITLLAHSKNMLVEAELGRLSGTEDDLTVEEFEARLTDVNMASKFIDETGIDALAVCIGNVHGKYPASGPNLRVDLLKELHALSLEKGVHLVLHGASGLSEELVKECINLGVRKFNVNTEVRKAYMDSLITPKNDLVHVMASAKEAMKAVVAEKMHLFGSAGKA* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1589 1374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 324 480 IPR036291 -
Pvu4g1589 1374 TIGRFAM cbbA: ketose-bisphosphate aldolase 1096 1374 IPR000771 GO:0005975|GO:0008270|GO:0016832
Pvu4g1589 1374 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 1 267 - -
Pvu4g1589 1374 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 279 1298 - -
Pvu4g1589 1374 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 297 IPR008927 -
Pvu4g1589 1374 Gene3D - 654 896 IPR037051 -
Pvu4g1589 1374 Gene3D - 2 167 - -
Pvu4g1589 1374 Gene3D - 319 484 - -
Pvu4g1589 1374 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 488 608 IPR029154 GO:0051287
Pvu4g1589 1374 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 289 IPR029154 GO:0051287
Pvu4g1589 1374 Gene3D Aldolase class I 1090 1374 IPR013785 -
Pvu4g1589 1374 Pfam Fructose-bisphosphate aldolase class-II 1098 1373 IPR000771 GO:0005975|GO:0008270|GO:0016832
Pvu4g1589 1374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 163 IPR036291 -
Pvu4g1589 1374 SUPERFAMILY Aldolase 1097 1374 - -
Pvu4g1589 1374 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 487 609 IPR008927 -
Pvu4g1589 1374 PANTHER ALDOLASE-RELATED 279 1298 - -
Pvu4g1589 1374 PANTHER ALDOLASE-RELATED 1 267 - -
Pvu4g1589 1374 Gene3D - 908 1089 IPR042213 -
Pvu4g1589 1374 Gene3D - 168 299 IPR013328 GO:0016491
Pvu4g1589 1374 Gene3D - 485 616 IPR013328 GO:0016491
Pvu4g1589 1374 CDD TBP_aldolase_IIB 1099 1372 IPR000771 GO:0005975|GO:0008270|GO:0016832
Pvu4g1589 1374 Pfam Nucleotide-binding C-terminal domain 917 1083 IPR031475 -
Pvu4g1589 1374 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 328 341 IPR002204 GO:0016491
Pvu4g1589 1374 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 IPR006115 GO:0050661
Pvu4g1589 1374 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 325 481 IPR006115 GO:0050661
Pvu4g1589 1374 SUPERFAMILY YgbK-like 655 1087 - -
Pvu4g1589 1374 Pfam Sugar-binding N-terminal domain 655 893 IPR010737 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1589 - - gmx:100779987 2423.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1589 4 43090741 43116648 Pvu4g1589 4 43090741 43116648 ECH