Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1398 ATGAACAAAATCTTAAGATTTTGTTACAGTTCAAATAGTTGGGCAAAGAGAGAAGAAAAAGTAGAAAGTGGTGATTTGATTGAAGATTCGATTGAAGAGAAGAAGAAGAGTGAGAAAATGGGGTTGAAATTGAAGGAGACGTTCTTCGTATCGCATGGATCACCAAGTCTCGCCGTGGATGATTCGATTCCGGCGAGGAAGTTCTTCAGTTCATGGAAAGAGCAGTTTCCGACGCCACCCTCCGCCATTCTCGTTGTCTCCGGCCACTGGGACACCAATCTTCCCACCGTCAACGTCGTTGACCGAAACGACACCGTCTACGACTTCTACGGCTTCCCCAAATCCATGTACAAGTTGAAATATCCAGCACCTGGGGCACCACACTTGGCCAAGAGGGTGAAGGAGGTGCTCTTAGGATCAGGGTTTAGCCATGTGGATGAAGACACGAAACGTGGGCTTGACCATGGTGCATGGGTGCCTCTGATGTTGATGTACCCAGAGGCAGATATCCCTGTGTGTCAACTCTCAGTTTCATCCAACAAGGGAGGTACTTACCACTATAACATGGGAAAGGCTTTGGCCCCTCTTAAAGATGAAGGTGTTCTGATCATTGGGTCTGGGAGTGCCACCCACAACCTCAGAGCAATGGGTCCTCGTAATAGCCCACCTGCTCCATGGGCTCAGGCTTTTATCTCCTGGCTGAAAACCTCTCTTCTTCATGGAAGATACGAGGAAGTAAATGAATATGAAGAGAAGGCTCCATATGCAAAAATGGCTCATCCTTGGCCTGATCATTTCTTCCCATTGCATGTGGCCATGGGTGCTGCTGGTGAAAATGCAAAGGCCAAAGTTGTTCATGATAGTTGGGATGCTGGTTCTATCTCTTATGCTTCTTTCAGTTTTGCAGCTACTGACATTTAA 921 0.4712 MNKILRFCYSSNSWAKREEKVESGDLIEDSIEEKKKSEKMGLKLKETFFVSHGSPSLAVDDSIPARKFFSSWKEQFPTPPSAILVVSGHWDTNLPTVNVVDRNDTVYDFYGFPKSMYKLKYPAPGAPHLAKRVKEVLLGSGFSHVDEDTKRGLDHGAWVPLMLMYPEADIPVCQLSVSSNKGGTYHYNMGKALAPLKDEGVLIIGSGSATHNLRAMGPRNSPPAPWAQAFISWLKTSLLHGRYEEVNEYEEKAPYAKMAHPWPDHFFPLHVAMGAAGENAKAKVVHDSWDAGSISYASFSFAATDI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1398 306 Gene3D - 34 302 - -
Pvu4g1398 306 SUPERFAMILY LigB-like 47 301 - -
Pvu4g1398 306 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 43 304 - -
Pvu4g1398 306 PIRSF Doxgns_DODA 40 303 IPR014436 GO:0008270|GO:0016701
Pvu4g1398 306 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 47 301 IPR004183 GO:0006725|GO:0008198|GO:0016491
Pvu4g1398 306 CDD 45_DOPA_Dioxygenase 47 301 IPR014436 GO:0008270|GO:0016701
Pvu4g1398 306 PANTHER UNCHARACTERIZED 43 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1398 Pvu-Chr4 40934588 40938515 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1398 K15777 - gmx:100810694 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1398 4 40934588 40938515 Pvu4g1398 4 40934588 40938515 ECH