Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1390 ATGGGTGTGGATATACAAGGTAAGCTTCGGCTAGCTCTCGGCTCAGTGAAAGATCATGCCTCTATTGGCAAGGCCATGATGTATCACTACCAACATGATGGCTTTTCCAACATAGAGATTGCAGTCCTGCGTGCCACTGGTCATGATAATGGCGCCATTGGTGACAAATACATGCATGAAATCCTCTTTCTTGTGTCAAACTCTCCAGGGTCCATTCCTTTTCTGGCTGAAAGGATTTCACATCGCCTAGGAAAAACTAAGGATCATGTTGTAGCCCTCAAGACCCTTGTCTTGATTCATCGCCTTCTTAGAGGGGGAAACAGGTCCTTTGAACAAGAGTTATGCAAGGCACATGTCTCAGGTCACCTACAAATTAGTACAAGGTGTTTCACAAAGAGTTCTGATCACCCTTCAGTTGGTTTCCTACATACATATGCAGCTTATCTTGAAGAGAGGATGAGTTGGCTCATAAACCAAGCAGGGAAACTTGAGCCTGTCATGTCCAAGGGGTTAGAGTTTAGGCGCTATGATGAGAAATCCTTTGATATGGCATTCAGAACATTGCCTAAATGCCAAGTGCTTATTGACAAGGTGTTGGAATGCTCACCACATCATATTTTGTGCTCAGATCATAGCCTGGCTCAAGCTGCTATGAGCAACACCTTGAGAGAAAGCTTCCAAGTTTATATGACATTTTCTGAAGGCATTGCAGCTCTTGTGAACATGTTTTTTGATCTAACAGCATCAGCCAGAGGCCTAGCCTATGAAATACTCAAGACAGCTTCTCTCCAGAGCCAAAAGCTTCATGATCTGTATGAAAGTTGCAAATATGTGTTTGAAAACAAGAATTTGGATTACCCTTCTGTTCAAATAATCAGTATGAGTCATATAGTGGCATTGGAACAACTTGGTAGTCAACAAAATGAACTTGCAACATCACACGTCTCTCTATCTAGCATCTCAAGTCCACCTCCAATTTCAGGCCTCTTAACAAAATCAAAAGAGATAGAGTTGGAAGTAGCAGCAGAAGAAAACAAAAGGAATGAAGAGAAATTTGATGTAAACCTGTCACCAACCCCAACTCTTTTTTCATGGACACTAGAGACTAAAATAAGCATGGTGTGGGTGGTGTTTGAAGATGAATTTCCCAATGAATCACAGGTTCTTCCAGCACAGCAAAAGCTTGGAATTGTTGATGCTGTTACTGGTATAAAAAGTGAATATGGTAGGCCTAGTGTGTTCCTGAATCCATTTACATCTACTTTTCAAACAAGCATGTCATCAAAGGTATGA 1293 0.4153 MGVDIQGKLRLALGSVKDHASIGKAMMYHYQHDGFSNIEIAVLRATGHDNGAIGDKYMHEILFLVSNSPGSIPFLAERISHRLGKTKDHVVALKTLVLIHRLLRGGNRSFEQELCKAHVSGHLQISTRCFTKSSDHPSVGFLHTYAAYLEERMSWLINQAGKLEPVMSKGLEFRRYDEKSFDMAFRTLPKCQVLIDKVLECSPHHILCSDHSLAQAAMSNTLRESFQVYMTFSEGIAALVNMFFDLTASARGLAYEILKTASLQSQKLHDLYESCKYVFENKNLDYPSVQIISMSHIVALEQLGSQQNELATSHVSLSSISSPPPISGLLTKSKEIELEVAAEENKRNEEKFDVNLSPTPTLFSWTLETKISMVWVVFEDEFPNESQVLPAQQKLGIVDAVTGIKSEYGRPSVFLNPFTSTFQTSMSSKV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1390 430 CDD ANTH_N_AP180_plant 38 155 - -
Pvu4g1390 430 ProSiteProfiles ENTH domain profile. 30 163 IPR013809 -
Pvu4g1390 430 PANTHER CLATHRIN ASSEMBLY PROTEIN-RELATED 1 386 - -
Pvu4g1390 430 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 386 IPR045192 GO:0048268|GO:0072583
Pvu4g1390 430 Gene3D - 8 157 IPR008942 -
Pvu4g1390 430 Gene3D ANTH domain 169 317 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu4g1390 430 SUPERFAMILY ENTH/VHS domain 37 154 IPR008942 -
Pvu4g1390 430 Pfam ANTH domain 38 303 IPR011417 GO:0005543
Pvu4g1390 430 SUPERFAMILY GAT-like domain 175 302 - -
Pvu4g1390 430 SMART enth_2 36 165 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1390 Pvu-Chr4 40867870 40869162 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1390 - - gmx:100808531 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1390 4 40867870 40869162 Pvu4g1390 4 40867870 40869162 ECH