Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1361 ATGAAGCCTTCTGTGCTGCGTTTGTCACTTTTTGTTCTTGTTCCTCTGCTTCTCTCCCTCTTCTTTCTAGCACTCATGCCTAAGGAAACCGCCATGACAACCTATGAGGTGTTTGGAGTGAAGATAGAGAAGAACCCACATCAGTCCAAACTCACTGAACTTGGAGTCTCAACTTGGAACAAGTGGGAAGGTGGTCCAACCAAAATTCCATGGTCCTTTAAAGAAGAAGAGACCATGTATGTGCTGGAGGGAAAAGTGAGGGTTACTGTTGAAGAATCTGTTGGGTCTTTTGAAATTGGGGCTGGTGATTTAGTTGTCTTCCCAAAAGGAATGAATATTACTTGGGAAGTGATTGAAGCTGTGAAGAAGCACTACAGCTTGAAAAAATAA 390 0.4282 MKPSVLRLSLFVLVPLLLSLFFLALMPKETAMTTYEVFGVKIEKNPHQSKLTELGVSTWNKWEGGPTKIPWSFKEEETMYVLEGKVRVTVEESVGSFEIGAGDLVVFPKGMNITWEVIEAVKKHYSLKK* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1361 129 CDD cupin_TM1112-like 58 127 - -
Pvu4g1361 129 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 7 129 - -
Pvu4g1361 129 Gene3D Jelly Rolls 28 127 IPR014710 -
Pvu4g1361 129 PANTHER OS04G0445200 PROTEIN 7 129 - -
Pvu4g1361 129 SUPERFAMILY RmlC-like cupins 50 125 IPR011051 -
Pvu4g1361 129 Pfam EutQ-like cupin domain 52 125 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1361 Pvu-Chr4 40428625 40430404 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1361 K06995 - gmx:100807654 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1361 4 40428625 40430404 Pvu4g1361 4 40428625 40430404 ECH