Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1355 ATGGCTTGTTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACATTGAAAATGGGTCAAAAGGCCAAAGAGCCAGCTGTTGCAGAGTTCATATCAGCACTAGCTGCAGGCAACAATGCACAACTAATGGTTGTGGCATGTGCTGGTGCAGCAGACTCCACCACACTAGCATTAGTCACTGCTGCACATCAAACTGGTGGCCATGTTGTTTGCATTGTCTCTAGCCATGAAGAACTAAAGGCCTCCAAAAGAGTCCTTGGAGTGAATGCCAGTGAAGTCCAATTCATGGTTGGAGAGGCTCAACAGGAGCTACTGCTGTTAAGGCAAGCAGATTTTGTGCTCATTGATTGCAACCTTGTGAGGCATGGAGAGATTGTTAAAGCAATCCAAGATGGTGGCATTGAGAATGGTGCAGTGGTTGTTGGCTGCAATGCACTCAGCTGTAGAGGGTCTTGGTGGTCTTGTGGATCAAAAACTCAGTTGTTGCCTATAGGAAAAGGGCTTCTGGTGACAAGATTTGGAGCAAGTGCTGCAAGTCCAAAACATGGATCTGGAGTGAGTAAGAGCAAAAGTAGTTGTTGGATTGTTAAGGTGGATAAATGCACTGGTGAAGAACATGTGTACAAGATCAGAGTTCCACAAGGAAAAGTGATTCAAGCTTAA 666 0.455 MACWSAENATKAYLNTLKMGQKAKEPAVAEFISALAAGNNAQLMVVACAGAADSTTLALVTAAHQTGGHVVCIVSSHEELKASKRVLGVNASEVQFMVGEAQQELLLLRQADFVLIDCNLVRHGEIVKAIQDGGIENGAVVVGCNALSCRGSWWSCGSKTQLLPIGKGLLVTRFGASAASPKHGSGVSKSKSSCWIVKVDKCTGEEHVYKIRVPQGKVIQA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1355 221 PANTHER DUF1442 FAMILY PROTEIN 1 221 IPR009902 -
Pvu4g1355 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
Pvu4g1355 221 Gene3D Vaccinia Virus protein VP39 5 173 IPR029063 -
Pvu4g1355 221 PANTHER BNAA09G06020D PROTEIN 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1355 Pvu-Chr4 40370716 40371795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1355 - - gmx:100805528 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1355 4 40370716 40371795 Pvu4g1355 4 40370716 40371795 ECH
Pvu4g1355 4 40370716 40371795 Pvu7g1147 7 14457164 14458282 PCT