Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1352 ATGCCCCAAAACGACATCCACGCCCACCAAAACGGTGAAACCACCGTCACCACCCCGCTCCACCCTCCACTTCTGACCCTCCACCTCCAAGCCATGACCTCCACCACTTCGACCTCCACCGACCCCCTCCCATCGGACGACGGCGCTGCGGTGAGGGCAGTCAACAAACGCTTCGAGGGCCTCCTCACTGTCCGGACCAAGGCCATCAAGGGAAAGGGAGCCTGGTACTGGGCCCACCTCGAGCCCATACTCGTCCCTCACCCAGATACCGGTCTCCCCAAAACCGTCAAACTCAAATGCTCCCTCTGCGACTCTCTCTTCTCCGCTTCGAACCCTTCCAGAACAGCTTCCGAACACTTAAAGCGTGGAACTTGCTCCAACTTCAGCTCTGGGTTGAGACCCGGCTCGGTGCCTTCTCCCCTGCCCATTTCCTCCATCACTCCCGGTTCCAACCGCAAAAGGGGTTCGCCTCAAATGGGTGCCACGTCGCCCTCTTCTTATCAAAATCACTCCTTGGCCTTGGTCGAGTCTTCCCGGTTCGACATCGGGTACCCCCAGATGCAGAACAGTAACAACAACAGCAATAGTAATAATAATAATAATAATAACAACAACAACATTATGCACTTGCAGCATCACGGGCAGAGCCAGCAGCATTTAATGTTGTCGGGTGGGAAGGATGATTTGTGTGCTTTGGCCATGTTTGAGGACAGTGTGAAGAAGTTGAAGAGTCCCAAGACTTCTCCTGGTCCTGCTTTGAGCAAGGACCAGGTGAATTCTGCTTTGGACTTGCTCTTCGATTGGTTCTACGAGACTTGCGGCTCTGTGTCCTTGTCGAGTCTGGAACATAGAAAGTTTCAGGCTTTTTTGAGCCAGGTTGGGTTGCCCGGAAATTTGAGGAGGGAGGTTTCTGGGGGGAGGCTTGATGCTAGGTTCGGGGAGGCCAAGGCTGAGTCCGAGGCGAGGATTAGGGACGCCATGTTTTTTCAGTTGGCGAGTGATGGGTGGAAGAGTGGGGGTTTGTTTAGCTTCAACCCGTGTTGTGGTGGGGGAGAGAGTTTGGTGAAGTTTGTGGTGAATCTCCCCAATGGGAGCAGTGTGTTTCAGAAGGCTGTGTTCACAGGTGGAGTGGAGAATTCCAAGTATGCCGAGGAGGTTTTGTGGGAGACGGTTACGGCGGTTACTGGGAGTGTTGTCCATAGGTGTGTGGGGATTGTCGCAGATAAGTTCAAGGCCAAGGCGTTGAGGAACTTGGAGGCGCAGCACCATTGGATGGTGAACACTTCCTGCCAGCTTCAGGGGTTGGTTAGCTTGATCAAGGATTTTAACCGCGAGTTGCCGCTTTTCAGGGATGTGATTGAGAATTGCTTGAAGGTTGCCAATTTTATGAACAGTGAGTCGCAGGTGAGGAGTCTTTTCCTCAAGTGCAGGGTGCAGGAGATGGATTGTGGCGGGCTAATTCGCGTGCCTTCACCCAAATGTGATCCGCTGAAGAATTTTCAATTGGTGTTTCCTATGTTGGAGGACATTTTGAGCTGTGCCAGAGTGATGCAGATGGTTGTGATGGAAGATGGGTTTAAGGTGATGTGTATGGAAGATACGTTGGCGAGGGAGGTTGCAGGAATGGTGCAGAATGAGGGGTTTTGGAACGAGTTGGAGGCGGTTTATTCAGTTGTGAAGCTTGTTAGAGGGATGGTGCATGATGTTGAGGCTGAGAGGCCATTGATTGGTAGGTGCTTGCCTCTCTGGGAGGAGCTGAGGAGCAAGGTGAAAGAGTGGTGTGGGAAGTTCAACATTGTGGAAGGACCTGTGGAGAAGATAGTTGAGAAGAGGTTTAGGAAGAATTATCACCCTGCGTGGGCAGCAGCGTTTATACTTGATCCACTTTACTTGATTAAGGATGCAAGTGGAAAGTATCTTCCTCCGTATAAGTGTTTGACGCGAGAACAGGAGAAGGATGTGGACAAGTTACTCACGAGGCTGGCTTCGCGAGAAGAGGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCAGATGGTCTTGATCCGCTTTATGCGCAGGCTGTTCAGATGAAGCAGAGGGATCCGATTACAGGGAAGATGAAAGTTGCAAATCCACTGAGTAGTAGACTTGTGTGGGAAACATGTTTGAGTGAGTTTAAATCCCTGGGGAAGATTGCAGTGAGGCTTATTTTTCTGCATGCAACTTCATGTGGGTTTAAGAGTAATTGGTCTTTTATGAGGAAATTTTCAGCTAATAAACAGTCAAGAGTTGCCTTGGAGAGGACTCAGAAAATGATATATATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCCAGTGAGGAAGAGAAGGATGCAGAGCTGTTTGCCATGTCTGGTAGTGAGGATGGCATGCTGGCTGAGGTTTATGCTGATGCTCCCTTAGTAGTTGCAATGGCTTGA 2451 0.5039 MPQNDIHAHQNGETTVTTPLHPPLLTLHLQAMTSTTSTSTDPLPSDDGAAVRAVNKRFEGLLTVRTKAIKGKGAWYWAHLEPILVPHPDTGLPKTVKLKCSLCDSLFSASNPSRTASEHLKRGTCSNFSSGLRPGSVPSPLPISSITPGSNRKRGSPQMGATSPSSYQNHSLALVESSRFDIGYPQMQNSNNNSNSNNNNNNNNNNIMHLQHHGQSQQHLMLSGGKDDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLFDWFYETCGSVSLSSLEHRKFQAFLSQVGLPGNLRREVSGGRLDARFGEAKAESEARIRDAMFFQLASDGWKSGGLFSFNPCCGGGESLVKFVVNLPNGSSVFQKAVFTGGVENSKYAEEVLWETVTAVTGSVVHRCVGIVADKFKAKALRNLEAQHHWMVNTSCQLQGLVSLIKDFNRELPLFRDVIENCLKVANFMNSESQVRSLFLKCRVQEMDCGGLIRVPSPKCDPLKNFQLVFPMLEDILSCARVMQMVVMEDGFKVMCMEDTLAREVAGMVQNEGFWNELEAVYSVVKLVRGMVHDVEAERPLIGRCLPLWEELRSKVKEWCGKFNIVEGPVEKIVEKRFRKNYHPAWAAAFILDPLYLIKDASGKYLPPYKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSDGLDPLYAQAVQMKQRDPITGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKFSANKQSRVALERTQKMIYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADAPLVVAMA* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1352 816 SUPERFAMILY Ribonuclease H-like 396 777 IPR012337 -
Pvu4g1352 816 PANTHER PUTATIVE ISOFORM 1-RELATED 44 808 - -
Pvu4g1352 816 MobiDBLite consensus disorder prediction 111 168 - -
Pvu4g1352 816 MobiDBLite consensus disorder prediction 1 20 - -
Pvu4g1352 816 PANTHER OSJNBA0013A04.12 PROTEIN 44 808 - -
Pvu4g1352 816 MobiDBLite consensus disorder prediction 183 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1352 Pvu-Chr4 40335823 40342441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1352 - - gmx:100814598 1405.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1352 4 40335823 40342441 Pvu7g1146 7 14414246 14420229 ECH
Pvu4g1352 4 40335823 40342441 Pvu4g1352 4 40335823 40342441 ECH
Pvu4g1352 4 40335823 40342441 Pvu7g1146 7 14414246 14420229 PCT