Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1346 ATGGCCAAACCCCAAAAGGATCTTCTTATACAACCCAATACAACATGTGAATGTCTTCTTAACGAACTTCAGATAATATGGAATGAAGTTGGGGAGTCTGAGACTGAAAAAGGTAGAATGTTGTATGAGCTTGAAGAAGAGTGTGTAGAAGTATACAGAAGAAAGGTAGATAAAGCAAATCGGTCTAGAGCTCAACTAAGGCAGGAAATTGCTGATTCTGAGGCAGAGCTTGCTTGTATCTGCTCGACAATGGGAGAGCGACCAGTGCATTTTAGGCAGTTTGACAAAGAGGCTGGAAGCTTGAAGGAAGAGCTTTCAAGAGTTCACCCAGAGCTGGACGAAATGCGAAAGAGGAAGTTTGAACGTAGAAATCAATTTATTGAAGTTCAAGAACAGATTCAAAGTATCTCAGATGAGATTTATAGTACAGGAGAATATATTACAGCTATTGTAGTTGAAAATGATTTGTCATTGAGAAAGCTTGAAGAATTGCACAGAGAGCTTCTTGCACTTCAGAAGGAGAAGAGTGAGCGCCTCAAGAAGGTTCAAGAGCAAATGTATACCTTGAATTCTCTCTGTTCAGTGCTTGGTTTGGACTTCAAGCAGACAGTCAGTGGAGTTCATCCTAGCTTAGGAATTTCAGAAGGTCCTAGGAGTGCCAATAGTGAAACCATCAATCAATTGGCTATTGCCATACAAGAACTCCGAAAAGTTAAATTACAGAGAATGCAGAGGCTTCAAGATCTAGCTTCAACAATGTTGGAGCTCTGGAATTTGATGGATACGCCTATTGAAGAGCAACAGATGTTTCAGAATGTTACTTGTAATATCGCTGCTTCAGAACATGAAGTAACTGAACCAAACAGCTTGTCTGAGAACTTCATCAATTATGTTGAGGCAGAAGTATCTAGGTTGGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAAAGAGCAGAGCTAGAGGAGATTTGTCAAAAGACTCATTTAATTCCAAAACTTGATAGTGCAGTGGAATACGCCGTTGAAGCGATAGAATCTGGATGCGTAGACCCAGCTTGTGTGCTTGAACAACTTGAACTTCAGATTGCCTCAGCAAAGGAGGAAGCTTTTGTCAGAAAAGAAATAATTGAAAAGGTTGAGAAATGGTTGGCAGCACTTGATGAAGAATCTTGGCTTGAGGAGTACAACATGGATGAAAATCGATACAATGCTGGGAGAGGTTCTCATCTTACTCTCAAGCGAGCGGAGAAAGCCCGTGGCCTGGTCTGCAAACTTCCGGCAATGGTAGAGGCTTTAACTTCAAAAACTGCATCATGGGAAAAGGACAAAGGCATCGAGTTCACATATGATGGTACCTGTCTGCTATCTATGCTTGAGAACTACTCCCTATCACGGCAAGAGAAGGAGCAAGAACGTCGTAAGCAGCGGGAACTGAAGAAACTTCAGGGACAAATAATAGTGGAAAAGGAAGTACTCTATGGGTCAAAACCAAGCCCTTCAAAGGCCCAGAGTGCAAAAAAGACCCCTAGGATCTCAACTGGAAGCCCAGCAAGTAGAAGAATCTCCTTTGGATGTCAGACATCAAAATCTGAATTAAAATACAGTCAATCATTCTCCAAAAGGAAGACAGACAAAGCCCACCGACTAAATAACCTGGATGATGATGCTTCATGTTTATCATCAGCTAGAAGAGGACTTGATATTGCCGGTTTTCCTATGAAAAAATTCTCTACTGGTGCTTTGAAGTGTTCGTGA 1767 0.412 MAKPQKDLLIQPNTTCECLLNELQIIWNEVGESETEKGRMLYELEEECVEVYRRKVDKANRSRAQLRQEIADSEAELACICSTMGERPVHFRQFDKEAGSLKEELSRVHPELDEMRKRKFERRNQFIEVQEQIQSISDEIYSTGEYITAIVVENDLSLRKLEELHRELLALQKEKSERLKKVQEQMYTLNSLCSVLGLDFKQTVSGVHPSLGISEGPRSANSETINQLAIAIQELRKVKLQRMQRLQDLASTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEVTEPNSLSENFINYVEAEVSRLEELKSSKMKELVLKKRAELEEICQKTHLIPKLDSAVEYAVEAIESGCVDPACVLEQLELQIASAKEEAFVRKEIIEKVEKWLAALDEESWLEEYNMDENRYNAGRGSHLTLKRAEKARGLVCKLPAMVEALTSKTASWEKDKGIEFTYDGTCLLSMLENYSLSRQEKEQERRKQRELKKLQGQIIVEKEVLYGSKPSPSKAQSAKKTPRISTGSPASRRISFGCQTSKSELKYSQSFSKRKTDKAHRLNNLDDDASCLSSARRGLDIAGFPMKKFSTGALKCS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1346 588 Pfam Microtubule associated protein (MAP65/ASE1 family) 19 514 - -
Pvu4g1346 588 MobiDBLite consensus disorder prediction 499 524 - -
Pvu4g1346 588 Coils Coil 154 185 - -
Pvu4g1346 588 MobiDBLite consensus disorder prediction 501 524 - -
Pvu4g1346 588 Coils Coil 462 488 - -
Pvu4g1346 588 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 584 - -
Pvu4g1346 588 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 584 IPR007145 GO:0000226|GO:0008017
Pvu4g1346 588 Coils Coil 49 76 - -
Pvu4g1346 588 Gene3D - 366 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1346 Pvu-Chr4 40268484 40274530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1346 11 543 EF-hand Containing Proteins AT5G62250 54.296 6.82e-173 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1346 K16732 - gmx:100777734 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1346 4 40268484 40274530 Pvu7g1142 7 14335713 14340730 ECH
Pvu4g1346 4 40268484 40274530 Pvu4g1346 4 40268484 40274530 ECH
Pvu4g1346 4 40268484 40274530 Pvu7g1142 7 14335713 14340730 PCT