Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1340 ATGGCACTTGAAACCTGGCTCATCAAGGTCAAAACGGCGCTGTCGCATAGCCTCACGAAGAAACCGTCGTTTTCCTCGTCGAAGCCAAAACACGTTGCCGTTTTGTCCTTCGAGATCGCGAACGTGATGTCGAAGCTCCTCCACCTCTGGCAGTCCCTCTCCGACGCCAACGTCGTTCGCCTCCGAAACGACGCCATCGCGCTAGAAGGCGTGCGCAAGCTCATCTCAAACGACGAGTCTTTTCTTCTAAGCCTCGCCGTAGCCGAGTTCGCCGACTCGCTCAGACTCGTCGCCGACTCGGTCTCCCGACTCAGCAACTACTGCCACGATCCTTCTCTCCGATCCTTCCACCGAATCTTCACCGAGTTCGCCAACTCGGGCCTCGACCCACGCGCGTGGACCCTCACCACCCCCAAAGACATCGAAACCAAACACAGAAAATTGCAACATTACGTGTCTCTCACGGCAACGCTCCACAAAGAAATCGACGCTCTCACGCTCCTCGAAAGCGCGTTTAAAAAAGCGCTTCTCAACGCTGACAACGCCGCCACCGAACACTCTTCCTGTCACAAAAAACTCAGCGATCTTCAGCAGAAGATATTCTGGCAGAAACAAGAGGTGAAGAACTTGAAGGAACGTTCCTTATGGAACAAAAACTTCGATGGGGTTGTTTTGTTGTTAGCAAGGTTCGTTTTCACTGTGTTAGCGCGGATCAAGGTTGTCTTCGGAATCGGACACAGTAGTGTTCCCTTTTTGTCACGTAGTTTGTCTTCCGTTTATCCCTCTGATCACCAAAACCCTATTTCTTCTTGCTCCTTTATTTCTGGGCCGTTAAAAAGCTCAAAACTTGATGAGGAAAACGAGGATTTGAGATATGGGTTTTTTGAGTCTAATTGCAAGGTGTTGAAGTTGAAGGGTGATGGTGATAGTGACACTCTGGGTGCTTCAGCTTTGGCCTTGCACTATGCAAACTTGGTGATGGTGTTGGAGAAGATGATAAAGTCACCCCAGTTGGTTGGGGTGGATGCTAGGGACGATTTGTATGGGATGCTACCAAGTAGCATAAGGTCATCTTTGAGGGCAAGATTGAGAGGGGTGGGGTTTTCTGCATGTGATGATCATGTGCTTGCTGGAGAATGGAGGGATGCATTGGGCAGGATTCTGGGGTGGTTGGCTCCATTGGCACATTACATGATCAAGTGGCACAGTGAAAGGAGCTATGAGCAGCAGAACTTGGTACCAAAAACCAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAAACAAGGAGAAGACAGAAGCTGCCATCACTGAGCTGCTTGTGGGGTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACAGCTAAGGCATTGTTTGAATGTACCAAATTTAATAATGGCTTCTTAAGCTTGCACAAGCCCAGCTAA 1428 0.4909 MALETWLIKVKTALSHSLTKKPSFSSSKPKHVAVLSFEIANVMSKLLHLWQSLSDANVVRLRNDAIALEGVRKLISNDESFLLSLAVAEFADSLRLVADSVSRLSNYCHDPSLRSFHRIFTEFANSGLDPRAWTLTTPKDIETKHRKLQHYVSLTATLHKEIDALTLLESAFKKALLNADNAATEHSSCHKKLSDLQQKIFWQKQEVKNLKERSLWNKNFDGVVLLLARFVFTVLARIKVVFGIGHSSVPFLSRSLSSVYPSDHQNPISSCSFISGPLKSSKLDEENEDLRYGFFESNCKVLKLKGDGDSDTLGASALALHYANLVMVLEKMIKSPQLVGVDARDDLYGMLPSSIRSSLRARLRGVGFSACDDHVLAGEWRDALGRILGWLAPLAHYMIKWHSERSYEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTKFNNGFLSLHKPS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1340 475 Pfam Protein of unknown function (DUF668) 312 400 IPR007700 GO:0045927
Pvu4g1340 475 Coils Coil 193 213 - -
Pvu4g1340 475 PANTHER DUF3475 DOMAIN PROTEIN 1 474 - -
Pvu4g1340 475 Pfam Domain of unknown function (DUF3475) 34 89 IPR021864 GO:0045927
Pvu4g1340 475 PANTHER BNAC09G50660D PROTEIN 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1340 Pvu-Chr4 40204138 40205565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1340 - - gmx:100801628 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1340 4 40204138 40205565 Pvu4g1340 4 40204138 40205565 ECH
Pvu4g1340 4 40204138 40205565 Pvu7g1140 7 14296035 14297474 PCT