Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1332 ATGGAGTCTGTTTTAAGCCAAGTTGGTGCAAGTTTCTGCAATGGCATTACCCCTAGAGGGGTTGTTAGTACCCATTTCAAGGCTTCTTCCTTTGGTGTTGGAGGGAGGCCAAGGCGTGTAATGTTGGTGAAAGCTGAGGCTGTCAGCATAAACCCTGATATCAGGAAGAGTGAAGAGAAGGTGGTGGATTCTGTGGTGGTCACTGAACTCTCTAAGCCCGTCAATGCTTATTGCAGATGTTGGAGATCAGGGACTTTTCCTCTATGTGATGGAAGCCATGTGAAGCACAACAAAGCCACTGGTGATAACGTTGGGCCTCTTCTTTTGAAAAAGTAA 336 0.4643 MESVLSQVGASFCNGITPRGVVSTHFKASSFGVGGRPRRVMLVKAEAVSINPDIRKSEEKVVDSVVVTELSKPVNAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1332 111 Pfam Iron-binding zinc finger CDGSH type 65 93 IPR018967 GO:0043231|GO:0051537
Pvu4g1332 111 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 23 111 - -
Pvu4g1332 111 Gene3D - 66 111 IPR042216 -
Pvu4g1332 111 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 23 111 IPR045131 GO:0010506|GO:0051537
Pvu4g1332 111 SMART znf_cdgsh 60 99 IPR018967 GO:0043231|GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1332 K23882 - gmx:100783951 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1332 4 40107113 40108733 Pvu4g1332 4 40107113 40108733 ECH